Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.21□□□□□ -1.9
AP3S2P59780 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
AP3S2P59780 MIR4474-201ENST00000579189 78 ntBASIC3.21□□□□□ -1.9
AP3S2P59780 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.21□□□□□ -1.9
AP3S2P59780 AC090616.5-202ENST00000582111 297 ntBASIC3.21□□□□□ -1.9
AP3S2P59780 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.21□□□□□ -1.9
AP3S2P59780 AC006023.2-201ENST00000609916 167 ntBASIC3.21□□□□□ -1.9
AP3S2P59780 AC100827.5-201ENST00000615883 426 ntBASIC3.21□□□□□ -1.9
AP3S2P59780 AC112200.1-201ENST00000625015 234 ntBASIC3.21□□□□□ -1.9
AP3S2P59780 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.21□□□□□ -1.9
AP3S2P59780 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
AP3S2P59780 MIR4496-201ENST00000635896 61 ntBASIC3.21□□□□□ -1.9
AP3S2P59780 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.21□□□□□ -1.9
AP3S2P59780 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.21□□□□□ -1.9
AP3S2P59780 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.21□□□□□ -1.9
AP3S2P59780 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
AP3S2P59780 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.21□□□□□ -1.9
AP3S2P59780 MTCO1P8-201ENST00000416914 1523 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
AP3S2P59780 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
AP3S2P59780 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
AP3S2P59780 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
AP3S2P59780 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
AP3S2P59780 RNA5SP391-201ENST00000363456 119 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 RNU6-805P-201ENST00000365643 106 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
AP3S2P59780 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
AP3S2P59780 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.2□□□□□ -1.9
AP3S2P59780 RNA5SP87-201ENST00000384155 118 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 MIR129-1-201ENST00000384972 72 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 EIF5P1-201ENST00000400019 1231 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.2□□□□□ -1.9
AP3S2P59780 HMGB3P20-201ENST00000417997 600 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 RPEP3-201ENST00000425462 676 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.2□□□□□ -1.9
AP3S2P59780 TRIAP1P1-201ENST00000427062 225 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.2□□□□□ -1.9
AP3S2P59780 MRPL50P1-201ENST00000431951 384 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 AL392003.1-201ENST00000434394 243 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 RPS3AP54-201ENST00000435535 734 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 MED6P1-201ENST00000439659 713 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 ARPC3P2-201ENST00000457786 533 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.2□□□□□ -1.9
AP3S2P59780 RPL21P104-201ENST00000464143 478 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 AC004815.1-201ENST00000484185 331 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.2□□□□□ -1.9
AP3S2P59780 AC106872.4-201ENST00000510050 523 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 TMEM248P1-201ENST00000510579 951 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.2□□□□□ -1.9
AP3S2P59780 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.2□□□□□ -1.9
AP3S2P59780 OR7H2P-201ENST00000513483 306 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 RNU6-1004P-201ENST00000516584 111 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 NDUFB9P3-201ENST00000521269 501 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
AP3S2P59780 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.2□□□□□ -1.9
AP3S2P59780 AP001922.4-201ENST00000526967 290 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 BRD9P1-201ENST00000529855 560 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.2□□□□□ -1.9
AP3S2P59780 OR4T1P-201ENST00000554933 911 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.2□□□□□ -1.9
AP3S2P59780 MIR4270-201ENST00000581799 70 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 AC005021.1-201ENST00000608730 355 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 AC068870.2-201ENST00000620635 389 ntBASIC3.2□□□□□ -1.9
AP3S2P59780 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.2□□□□□ -1.9
AP3S2P59780 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
AP3S2P59780 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.2□□□□□ -1.9
AP3S2P59780 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
AP3S2P59780 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
AP3S2P59780 AL079305.1-201ENST00000623159 3008 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.19□□□□□ -1.9
AP3S2P59780 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.19□□□□□ -1.9
AP3S2P59780 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
AP3S2P59780 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.19□□□□□ -1.9
AP3S2P59780 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.19□□□□□ -1.9
AP3S2P59780 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.19□□□□□ -1.9
AP3S2P59780 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.19□□□□□ -1.9
AP3S2P59780 RNA5SP424-201ENST00000390988 115 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.19□□□□□ -1.9
AP3S2P59780 AC017079.2-201ENST00000416102 485 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 RPS3AP46-201ENST00000448352 682 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.19□□□□□ -1.9
AP3S2P59780 PPIA-203ENST00000451562 544 ntTSL 2 BASIC3.19□□□□□ -1.9
AP3S2P59780 HMGB1P26-201ENST00000452520 628 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 MTND2P28-201ENST00000457540 1044 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 NF1P3-201ENST00000457709 450 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 RN7SL354P-201ENST00000469282 294 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 FCF1P3-201ENST00000496394 590 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 RPL23AP55-201ENST00000498163 452 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 AC021146.7-201ENST00000509604 775 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 PHBP14-201ENST00000512887 367 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 RNA5SP208-201ENST00000516156 78 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 RNA5SP179-201ENST00000517284 121 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.19□□□□□ -1.9
AP3S2P59780 AC008011.1-201ENST00000545989 227 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.19□□□□□ -1.9
AP3S2P59780 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
AP3S2P59780 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.19□□□□□ -1.9
AP3S2P59780 AP005901.4-201ENST00000577336 569 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 MIR5010-201ENST00000582846 120 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 AC245128.3-201ENST00000594721 748 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms