Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AP003072.4-201ENST00000624580 310 ntBASIC3.72□□□□□ -1.81
LIM2P55344 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
LIM2P55344 LINC02471-203ENST00000641941 4752 ntBASIC3.72□□□□□ -1.81
LIM2P55344 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
LIM2P55344 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.71□□□□□ -1.81
LIM2P55344 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
LIM2P55344 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LIM2P55344 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.71□□□□□ -1.82
LIM2P55344 AL353743.4-201ENST00000422653 1547 ntBASIC3.71□□□□□ -1.82
LIM2P55344 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
LIM2P55344 AC008173.1-201ENST00000418901 264 ntBASIC3.71□□□□□ -1.82
LIM2P55344 Z97055.1-201ENST00000419730 712 ntBASIC3.71□□□□□ -1.82
LIM2P55344 USP12PY-201ENST00000427677 1064 ntBASIC3.71□□□□□ -1.82
LIM2P55344 MTCO1P43-201ENST00000431831 488 ntBASIC3.71□□□□□ -1.82
LIM2P55344 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.71□□□□□ -1.82
LIM2P55344 ATP5HP2-201ENST00000433885 485 ntBASIC3.71□□□□□ -1.82
LIM2P55344 KCTD9P3-201ENST00000434597 1169 ntBASIC3.71□□□□□ -1.82
LIM2P55344 AC096638.2-201ENST00000434965 711 ntBASIC3.71□□□□□ -1.82
LIM2P55344 RANP8-201ENST00000444720 713 ntBASIC3.71□□□□□ -1.82
LIM2P55344 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.71□□□□□ -1.82
LIM2P55344 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.71□□□□□ -1.82
LIM2P55344 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.71□□□□□ -1.82
LIM2P55344 IFNWP4-201ENST00000453148 294 ntBASIC3.71□□□□□ -1.82
LIM2P55344 AL133477.1-201ENST00000457472 514 ntBASIC3.71□□□□□ -1.82
LIM2P55344 AC008379.1-201ENST00000463655 464 ntBASIC3.71□□□□□ -1.82
LIM2P55344 CYCSP20-201ENST00000473154 315 ntBASIC3.71□□□□□ -1.82
LIM2P55344 PPIAP15-201ENST00000479662 484 ntBASIC3.71□□□□□ -1.82
LIM2P55344 AC068587.1-201ENST00000483613 781 ntBASIC3.71□□□□□ -1.82
LIM2P55344 RPS3AP6-201ENST00000484430 795 ntBASIC3.71□□□□□ -1.82
LIM2P55344 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
LIM2P55344 RPL7P24-201ENST00000493052 752 ntBASIC3.71□□□□□ -1.82
LIM2P55344 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.71□□□□□ -1.82
LIM2P55344 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
LIM2P55344 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.71□□□□□ -1.82
LIM2P55344 AC113430.1-201ENST00000506872 718 ntBASIC3.71□□□□□ -1.82
LIM2P55344 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.71□□□□□ -1.82
LIM2P55344 AC026726.1-201ENST00000512859 601 ntBASIC3.71□□□□□ -1.82
LIM2P55344 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.71□□□□□ -1.82
LIM2P55344 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.71□□□□□ -1.82
LIM2P55344 COX6B1P6-201ENST00000522347 255 ntBASIC3.71□□□□□ -1.82
LIM2P55344 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.71□□□□□ -1.82
LIM2P55344 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.71□□□□□ -1.82
LIM2P55344 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.71□□□□□ -1.82
LIM2P55344 AC107016.1-201ENST00000550463 337 ntBASIC3.71□□□□□ -1.82
LIM2P55344 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.71□□□□□ -1.82
LIM2P55344 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.71□□□□□ -1.82
LIM2P55344 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.71□□□□□ -1.82
LIM2P55344 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.71□□□□□ -1.82
LIM2P55344 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.71□□□□□ -1.82
LIM2P55344 MIR4512-201ENST00000583257 77 ntBASIC3.71□□□□□ -1.82
LIM2P55344 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.71□□□□□ -1.82
LIM2P55344 AC098483.2-201ENST00000603158 454 ntBASIC3.71□□□□□ -1.82
LIM2P55344 AL606490.9-201ENST00000603331 271 ntBASIC3.71□□□□□ -1.82
LIM2P55344 AC010857.1-201ENST00000606398 594 ntBASIC3.71□□□□□ -1.82
LIM2P55344 AC112503.2-201ENST00000609005 552 ntBASIC3.71□□□□□ -1.82
LIM2P55344 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LIM2P55344 RMST_9.1-201ENST00000619945 193 ntBASIC3.71□□□□□ -1.82
LIM2P55344 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.71□□□□□ -1.82
LIM2P55344 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.71□□□□□ -1.82
LIM2P55344 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LIM2P55344 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
LIM2P55344 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.71□□□□□ -1.82
LIM2P55344 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
LIM2P55344 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LIM2P55344 IPO8P1-201ENST00000455509 3109 ntBASIC3.7□□□□□ -1.82
LIM2P55344 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
LIM2P55344 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LIM2P55344 RNA5SP322-201ENST00000363617 119 ntBASIC3.7□□□□□ -1.82
LIM2P55344 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LIM2P55344 RNU2-65P-201ENST00000410162 185 ntBASIC3.7□□□□□ -1.82
LIM2P55344 RNU2-6P-201ENST00000411404 190 ntBASIC3.7□□□□□ -1.82
LIM2P55344 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.7□□□□□ -1.82
LIM2P55344 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.7□□□□□ -1.82
LIM2P55344 NPM1P34-201ENST00000428821 893 ntBASIC3.7□□□□□ -1.82
LIM2P55344 AL512637.2-201ENST00000431287 1256 ntBASIC3.7□□□□□ -1.82
LIM2P55344 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.7□□□□□ -1.82
LIM2P55344 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.7□□□□□ -1.82
LIM2P55344 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.7□□□□□ -1.82
LIM2P55344 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.7□□□□□ -1.82
LIM2P55344 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.7□□□□□ -1.82
LIM2P55344 RPL21P11-201ENST00000461458 483 ntBASIC3.7□□□□□ -1.82
LIM2P55344 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.7□□□□□ -1.82
LIM2P55344 AC010460.1-201ENST00000507087 466 ntBASIC3.7□□□□□ -1.82
LIM2P55344 AF186190.1-201ENST00000517470 480 ntBASIC3.7□□□□□ -1.82
LIM2P55344 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.7□□□□□ -1.82
LIM2P55344 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LIM2P55344 AP000916.1-201ENST00000533869 835 ntBASIC3.7□□□□□ -1.82
LIM2P55344 TOMM20P2-201ENST00000540082 421 ntBASIC3.7□□□□□ -1.82
LIM2P55344 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
LIM2P55344 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.7□□□□□ -1.82
LIM2P55344 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.7□□□□□ -1.82
LIM2P55344 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.7□□□□□ -1.82
LIM2P55344 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.7□□□□□ -1.82
LIM2P55344 MIR3160-1-201ENST00000577972 85 ntBASIC3.7□□□□□ -1.82
LIM2P55344 AC090312.2-201ENST00000582687 378 ntBASIC3.7□□□□□ -1.82
LIM2P55344 AC115085.1-201ENST00000588924 229 ntBASIC3.7□□□□□ -1.82
LIM2P55344 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.7□□□□□ -1.82
LIM2P55344 ABI1P1-201ENST00000603375 1120 ntBASIC3.7□□□□□ -1.82
LIM2P55344 AC120053.1-201ENST00000607706 736 ntBASIC3.7□□□□□ -1.82
LIM2P55344 AC245100.7-201ENST00000609678 442 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms