Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.28□□□□□ -1.72
HMGCS2P54868 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMGCS2P54868 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMGCS2P54868 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMGCS2P54868 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMGCS2P54868 Y_RNA.110-201ENST00000363220 99 ntBASIC4.28□□□□□ -1.72
HMGCS2P54868 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMGCS2P54868 RNA5SP424-201ENST00000390988 115 ntBASIC4.28□□□□□ -1.72
HMGCS2P54868 RN7SKP199-201ENST00000410325 305 ntBASIC4.28□□□□□ -1.72
HMGCS2P54868 AC245054.1-201ENST00000420944 258 ntBASIC4.28□□□□□ -1.72
HMGCS2P54868 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.28□□□□□ -1.72
HMGCS2P54868 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.28□□□□□ -1.72
HMGCS2P54868 AC073464.3-201ENST00000422564 712 ntBASIC4.28□□□□□ -1.72
HMGCS2P54868 RNF19BPX-201ENST00000426224 625 ntBASIC4.28□□□□□ -1.72
HMGCS2P54868 RPS26P47-201ENST00000427219 348 ntBASIC4.28□□□□□ -1.72
HMGCS2P54868 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.28□□□□□ -1.72
HMGCS2P54868 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.28□□□□□ -1.72
HMGCS2P54868 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HMGCS2P54868 AC008155.2-201ENST00000464337 397 ntBASIC4.28□□□□□ -1.72
HMGCS2P54868 CCDC75P1-201ENST00000469247 791 ntBASIC4.28□□□□□ -1.72
HMGCS2P54868 FABP5P6-201ENST00000510588 409 ntBASIC4.28□□□□□ -1.72
HMGCS2P54868 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.28□□□□□ -1.72
HMGCS2P54868 SNORA70.18-201ENST00000516696 98 ntBASIC4.28□□□□□ -1.72
HMGCS2P54868 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.28□□□□□ -1.72
HMGCS2P54868 AC103843.2-201ENST00000530523 682 ntBASIC4.28□□□□□ -1.72
HMGCS2P54868 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.28□□□□□ -1.72
HMGCS2P54868 AC008011.1-201ENST00000545989 227 ntBASIC4.28□□□□□ -1.72
HMGCS2P54868 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.28□□□□□ -1.72
HMGCS2P54868 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.28□□□□□ -1.72
HMGCS2P54868 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.28□□□□□ -1.72
HMGCS2P54868 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.28□□□□□ -1.72
HMGCS2P54868 AC012603.1-201ENST00000606424 528 ntBASIC4.28□□□□□ -1.72
HMGCS2P54868 AC079298.2-201ENST00000623885 459 ntBASIC4.28□□□□□ -1.72
HMGCS2P54868 AC092159.4-201ENST00000624944 550 ntBASIC4.28□□□□□ -1.72
HMGCS2P54868 MIR3651-201ENST00000630427 90 ntBASIC4.28□□□□□ -1.72
HMGCS2P54868 ZNF962P-201ENST00000443465 3140 ntBASIC4.28□□□□□ -1.72
HMGCS2P54868 AC009313.2-201ENST00000417893 1941 ntBASIC4.28□□□□□ -1.72
HMGCS2P54868 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.28□□□□□ -1.72
HMGCS2P54868 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.28□□□□□ -1.72
HMGCS2P54868 AC090971.4-201ENST00000560291 1800 ntBASIC4.28□□□□□ -1.72
HMGCS2P54868 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.73
HMGCS2P54868 LINC01109-201ENST00000603837 3081 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 MAPK10-349ENST00000641767 3661 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
HMGCS2P54868 AP001273.1-201ENST00000624493 3152 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HMGCS2P54868 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.27□□□□□ -1.73
HMGCS2P54868 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HMGCS2P54868 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
HMGCS2P54868 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMGCS2P54868 RN7SKP177-201ENST00000410567 355 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 RNU2-72P-201ENST00000411175 163 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.27□□□□□ -1.73
HMGCS2P54868 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.27□□□□□ -1.73
HMGCS2P54868 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.27□□□□□ -1.73
HMGCS2P54868 XKRY2-201ENST00000442362 1093 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 MTND2P25-201ENST00000449028 610 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 AL353718.1-201ENST00000451028 517 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.27□□□□□ -1.73
HMGCS2P54868 AC006511.1-201ENST00000470614 315 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 AC108157.1-201ENST00000510511 539 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 RNU6-889P-201ENST00000517189 103 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 HMGB1P19-201ENST00000517578 577 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 AC008802.1-201ENST00000519121 791 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 RANP9-201ENST00000519957 271 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.27□□□□□ -1.73
HMGCS2P54868 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.27□□□□□ -1.73
HMGCS2P54868 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HMGCS2P54868 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 LINC00557-201ENST00000563184 1279 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
HMGCS2P54868 AL133247.2-201ENST00000603236 482 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.27□□□□□ -1.73
HMGCS2P54868 AL136370.1-201ENST00000608166 691 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.27□□□□□ -1.73
HMGCS2P54868 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.27□□□□□ -1.73
HMGCS2P54868 AP000553.6-201ENST00000641242 118 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 AL049781.1-201ENST00000623195 3585 ntBASIC4.27□□□□□ -1.73
HMGCS2P54868 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HMGCS2P54868 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HMGCS2P54868 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HMGCS2P54868 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMGCS2P54868 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HMGCS2P54868 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.26□□□□□ -1.73
HMGCS2P54868 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
HMGCS2P54868 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HMGCS2P54868 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HMGCS2P54868 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HMGCS2P54868 AC234772.1-201ENST00000377927 937 ntBASIC4.26□□□□□ -1.73
HMGCS2P54868 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HMGCS2P54868 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.26□□□□□ -1.73
HMGCS2P54868 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.26□□□□□ -1.73
HMGCS2P54868 RPL17P35-201ENST00000432217 549 ntBASIC4.26□□□□□ -1.73
HMGCS2P54868 AL645931.1-201ENST00000439737 410 ntBASIC4.26□□□□□ -1.73
HMGCS2P54868 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.26□□□□□ -1.73
HMGCS2P54868 AP002345.1-201ENST00000456493 928 ntBASIC4.26□□□□□ -1.73
HMGCS2P54868 UBA52P3-201ENST00000491303 382 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms