Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5□□□□□ -1.61
COPAP53621 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5□□□□□ -1.61
COPAP53621 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5□□□□□ -1.61
COPAP53621 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5□□□□□ -1.61
COPAP53621 AC017100.2-201ENST00000584628 355 ntBASIC5□□□□□ -1.61
COPAP53621 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5□□□□□ -1.61
COPAP53621 AC008687.2-201ENST00000597865 520 ntBASIC5□□□□□ -1.61
COPAP53621 AL512782.1-201ENST00000603093 364 ntBASIC5□□□□□ -1.61
COPAP53621 AC009220.3-201ENST00000604318 586 ntBASIC5□□□□□ -1.61
COPAP53621 AC121247.2-201ENST00000604776 136 ntBASIC5□□□□□ -1.61
COPAP53621 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5□□□□□ -1.61
COPAP53621 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
COPAP53621 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5□□□□□ -1.61
COPAP53621 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5□□□□□ -1.61
COPAP53621 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5□□□□□ -1.61
COPAP53621 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5□□□□□ -1.61
COPAP53621 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COPAP53621 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
COPAP53621 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
COPAP53621 AC005539.1-201ENST00000443768 1479 ntBASIC5□□□□□ -1.61
COPAP53621 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COPAP53621 SCARNA15-201ENST00000607520 4325 ntBASIC4.99□□□□□ -1.61
COPAP53621 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
COPAP53621 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COPAP53621 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
COPAP53621 RNU5D-1-201ENST00000363299 116 ntBASIC4.99□□□□□ -1.61
COPAP53621 RPS16P5-201ENST00000406501 404 ntBASIC4.99□□□□□ -1.61
COPAP53621 AC016397.1-201ENST00000412463 242 ntBASIC4.99□□□□□ -1.61
COPAP53621 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.99□□□□□ -1.61
COPAP53621 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.99□□□□□ -1.61
COPAP53621 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.99□□□□□ -1.61
COPAP53621 MTND5P2-201ENST00000442927 1142 ntBASIC4.99□□□□□ -1.61
COPAP53621 RSL24D1P3-201ENST00000449255 495 ntBASIC4.99□□□□□ -1.61
COPAP53621 NDUFA5P7-201ENST00000452914 242 ntBASIC4.99□□□□□ -1.61
COPAP53621 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.99□□□□□ -1.61
COPAP53621 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COPAP53621 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.99□□□□□ -1.61
COPAP53621 RPL23AP56-201ENST00000460778 453 ntBASIC4.99□□□□□ -1.61
COPAP53621 AC091180.1-201ENST00000462104 372 ntBASIC4.99□□□□□ -1.61
COPAP53621 RPL7P18-201ENST00000478965 734 ntBASIC4.99□□□□□ -1.61
COPAP53621 AC090686.1-201ENST00000481577 749 ntBASIC4.99□□□□□ -1.61
COPAP53621 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.99□□□□□ -1.61
COPAP53621 AC011005.3-201ENST00000491624 395 ntBASIC4.99□□□□□ -1.61
COPAP53621 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.99□□□□□ -1.61
COPAP53621 AC021146.8-201ENST00000507455 733 ntBASIC4.99□□□□□ -1.61
COPAP53621 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.99□□□□□ -1.61
COPAP53621 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.99□□□□□ -1.61
COPAP53621 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.99□□□□□ -1.61
COPAP53621 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.99□□□□□ -1.61
COPAP53621 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.99□□□□□ -1.61
COPAP53621 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.99□□□□□ -1.61
COPAP53621 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.99□□□□□ -1.61
COPAP53621 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.99□□□□□ -1.61
COPAP53621 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.99□□□□□ -1.61
COPAP53621 TVP23CP2-201ENST00000571473 623 ntBASIC4.99□□□□□ -1.61
COPAP53621 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.99□□□□□ -1.61
COPAP53621 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.99□□□□□ -1.61
COPAP53621 VN1R82P-201ENST00000601481 356 ntBASIC4.99□□□□□ -1.61
COPAP53621 AL354760.1-201ENST00000608357 643 ntBASIC4.99□□□□□ -1.61
COPAP53621 AP003072.4-201ENST00000624580 310 ntBASIC4.99□□□□□ -1.61
COPAP53621 MIR7641-1-201ENST00000627518 61 ntBASIC4.99□□□□□ -1.61
COPAP53621 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
COPAP53621 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COPAP53621 AL139811.1-201ENST00000424779 2299 ntBASIC4.99□□□□□ -1.61
COPAP53621 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COPAP53621 NEAT1-202ENST00000501122 22743 ntBASIC4.99□□□□□ -1.61
COPAP53621 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
COPAP53621 SAGE2P-201ENST00000420011 2126 ntBASIC4.99□□□□□ -1.61
COPAP53621 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.98□□□□□ -1.61
COPAP53621 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COPAP53621 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COPAP53621 AC007529.1-201ENST00000418574 2178 ntBASIC4.98□□□□□ -1.61
COPAP53621 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COPAP53621 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.98□□□□□ -1.61
COPAP53621 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.98□□□□□ -1.61
COPAP53621 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
COPAP53621 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COPAP53621 RNU6-492P-201ENST00000363035 104 ntBASIC4.98□□□□□ -1.61
COPAP53621 RNU1-32P-201ENST00000363937 159 ntBASIC4.98□□□□□ -1.61
COPAP53621 PRRC2CP1-201ENST00000404428 159 ntBASIC4.98□□□□□ -1.61
COPAP53621 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.98□□□□□ -1.61
COPAP53621 MIR1302-8-201ENST00000408342 128 ntBASIC4.98□□□□□ -1.61
COPAP53621 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.98□□□□□ -1.61
COPAP53621 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.98□□□□□ -1.61
COPAP53621 AC119751.6-201ENST00000416712 186 ntBASIC4.98□□□□□ -1.61
COPAP53621 USP9YP26-201ENST00000421008 661 ntBASIC4.98□□□□□ -1.61
COPAP53621 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.98□□□□□ -1.61
COPAP53621 AL365203.2-201ENST00000423444 196 ntBASIC4.98□□□□□ -1.61
COPAP53621 RPL30P3-201ENST00000424262 333 ntBASIC4.98□□□□□ -1.61
COPAP53621 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.98□□□□□ -1.61
COPAP53621 SKP1P3-201ENST00000429280 487 ntBASIC4.98□□□□□ -1.61
COPAP53621 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.98□□□□□ -1.61
COPAP53621 MTCYBP34-201ENST00000439552 670 ntBASIC4.98□□□□□ -1.61
COPAP53621 AL450023.3-201ENST00000440592 271 ntBASIC4.98□□□□□ -1.61
COPAP53621 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COPAP53621 AC004980.3-201ENST00000447046 365 ntBASIC4.98□□□□□ -1.61
COPAP53621 OR1H1P-201ENST00000448731 937 ntBASIC4.98□□□□□ -1.61
COPAP53621 SLC25A18P1-201ENST00000449385 454 ntBASIC4.98□□□□□ -1.61
COPAP53621 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.98□□□□□ -1.61
COPAP53621 NF1P3-201ENST00000457709 450 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms