Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.16□□□□□ -1.74
NUP98P52948 AC087888.1-201ENST00000550884 1254 ntBASIC4.16□□□□□ -1.74
NUP98P52948 AL121576.1-201ENST00000556055 276 ntBASIC4.16□□□□□ -1.74
NUP98P52948 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.16□□□□□ -1.74
NUP98P52948 AF117829.1-206ENST00000621883 3802 ntBASIC4.16□□□□□ -1.74
NUP98P52948 AC079298.2-201ENST00000623885 459 ntBASIC4.16□□□□□ -1.74
NUP98P52948 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUP98P52948 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUP98P52948 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.15□□□□□ -1.74
NUP98P52948 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
NUP98P52948 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NUP98P52948 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
NUP98P52948 CR381670.1-201ENST00000624291 1693 ntBASIC4.15□□□□□ -1.74
NUP98P52948 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.15□□□□□ -1.74
NUP98P52948 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NUP98P52948 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NUP98P52948 MIR448-201ENST00000362131 111 ntBASIC4.15□□□□□ -1.75
NUP98P52948 RNA5SP322-201ENST00000363617 119 ntBASIC4.15□□□□□ -1.75
NUP98P52948 TMED11P-201ENST00000479478 690 ntBASIC4.15□□□□□ -1.75
NUP98P52948 RPL23AP73-201ENST00000492507 471 ntBASIC4.15□□□□□ -1.75
NUP98P52948 AC008885.1-201ENST00000514930 301 ntBASIC4.15□□□□□ -1.75
NUP98P52948 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.15□□□□□ -1.75
NUP98P52948 SCARNA20.6-201ENST00000517251 106 ntBASIC4.15□□□□□ -1.75
NUP98P52948 FTH1P11-201ENST00000517577 551 ntBASIC4.15□□□□□ -1.75
NUP98P52948 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.15□□□□□ -1.75
NUP98P52948 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.15□□□□□ -1.75
NUP98P52948 AC100793.4-201ENST00000613683 429 ntBASIC4.15□□□□□ -1.75
NUP98P52948 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.15□□□□□ -1.75
NUP98P52948 AC103858.2-201ENST00000621471 543 ntBASIC4.15□□□□□ -1.75
NUP98P52948 AC012078.1-201ENST00000405035 1646 ntBASIC4.15□□□□□ -1.75
NUP98P52948 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
NUP98P52948 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
NUP98P52948 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
NUP98P52948 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NUP98P52948 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.75
NUP98P52948 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
NUP98P52948 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.15□□□□□ -1.75
NUP98P52948 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
NUP98P52948 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
NUP98P52948 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.15□□□□□ -1.75
NUP98P52948 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.15□□□□□ -1.75
NUP98P52948 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NUP98P52948 UBA52P6-201ENST00000399822 382 ntBASIC4.14□□□□□ -1.75
NUP98P52948 AL158071.1-201ENST00000430315 461 ntBASIC4.14□□□□□ -1.75
NUP98P52948 HMGB3P14-201ENST00000494195 599 ntBASIC4.14□□□□□ -1.75
NUP98P52948 AC004024.1-201ENST00000549244 247 ntBASIC4.14□□□□□ -1.75
NUP98P52948 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.14□□□□□ -1.75
NUP98P52948 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.14□□□□□ -1.75
NUP98P52948 MIR4298-201ENST00000584380 73 ntBASIC4.14□□□□□ -1.75
NUP98P52948 OR1AB1P-201ENST00000585564 761 ntBASIC4.14□□□□□ -1.75
NUP98P52948 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.14□□□□□ -1.75
NUP98P52948 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
NUP98P52948 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
NUP98P52948 NCAPGP1-201ENST00000505112 1814 ntBASIC4.14□□□□□ -1.75
NUP98P52948 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NUP98P52948 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NUP98P52948 SNORA54-201ENST00000384281 123 ntBASIC4.14□□□□□ -1.75
NUP98P52948 AL356968.1-201ENST00000416622 474 ntBASIC4.14□□□□□ -1.75
NUP98P52948 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NUP98P52948 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.14□□□□□ -1.75
NUP98P52948 AC000041.1-201ENST00000439655 175 ntBASIC4.14□□□□□ -1.75
NUP98P52948 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.14□□□□□ -1.75
NUP98P52948 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.14□□□□□ -1.75
NUP98P52948 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.14□□□□□ -1.75
NUP98P52948 AL157817.1-201ENST00000614264 790 ntBASIC4.14□□□□□ -1.75
NUP98P52948 AC009237.17-201ENST00000618111 748 ntBASIC4.14□□□□□ -1.75
NUP98P52948 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
NUP98P52948 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
NUP98P52948 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.13□□□□□ -1.75
NUP98P52948 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUP98P52948 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.13□□□□□ -1.75
NUP98P52948 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.13□□□□□ -1.75
NUP98P52948 CR383658.2-201ENST00000547576 1525 ntBASIC4.13□□□□□ -1.75
NUP98P52948 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NUP98P52948 RNU1-140P-201ENST00000365040 165 ntBASIC4.13□□□□□ -1.75
NUP98P52948 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.13□□□□□ -1.75
NUP98P52948 UBE2DNL-203ENST00000474922 222 ntBASIC4.13□□□□□ -1.75
NUP98P52948 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.13□□□□□ -1.75
NUP98P52948 AC006518.1-201ENST00000541449 943 ntBASIC4.13□□□□□ -1.75
NUP98P52948 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.13□□□□□ -1.75
NUP98P52948 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.13□□□□□ -1.75
NUP98P52948 AL162713.1-201ENST00000604480 262 ntBASIC4.13□□□□□ -1.75
NUP98P52948 AC244517.3-201ENST00000616254 1235 ntBASIC4.13□□□□□ -1.75
NUP98P52948 AL356321.1-201ENST00000621360 228 ntBASIC4.13□□□□□ -1.75
NUP98P52948 AC006386.2-201ENST00000624491 75 ntBASIC4.13□□□□□ -1.75
NUP98P52948 AC012005.1-201ENST00000624575 75 ntBASIC4.13□□□□□ -1.75
NUP98P52948 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.13□□□□□ -1.75
NUP98P52948 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.13□□□□□ -1.75
NUP98P52948 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUP98P52948 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NUP98P52948 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.13□□□□□ -1.75
NUP98P52948 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NUP98P52948 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUP98P52948 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
NUP98P52948 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NUP98P52948 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.12□□□□□ -1.75
NUP98P52948 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.12□□□□□ -1.75
NUP98P52948 AL391417.1-201ENST00000404100 426 ntBASIC4.12□□□□□ -1.75
NUP98P52948 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NUP98P52948 HMGB1P16-201ENST00000447155 540 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms