Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL162151.2-201ENST00000448875 158 ntBASIC4.35□□□□□ -1.71
LHX1P48742 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.35□□□□□ -1.71
LHX1P48742 CAB39P1-201ENST00000502277 460 ntBASIC4.35□□□□□ -1.71
LHX1P48742 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.35□□□□□ -1.71
LHX1P48742 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.35□□□□□ -1.71
LHX1P48742 AC026414.1-201ENST00000504046 698 ntBASIC4.35□□□□□ -1.71
LHX1P48742 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.35□□□□□ -1.71
LHX1P48742 PPBPP1-201ENST00000510807 373 ntBASIC4.35□□□□□ -1.71
LHX1P48742 PRELID3BP4-201ENST00000515476 571 ntBASIC4.35□□□□□ -1.71
LHX1P48742 RNU7-143P-201ENST00000516781 65 ntBASIC4.35□□□□□ -1.71
LHX1P48742 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.35□□□□□ -1.71
LHX1P48742 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.35□□□□□ -1.71
LHX1P48742 AC084824.1-201ENST00000550917 1005 ntBASIC4.35□□□□□ -1.71
LHX1P48742 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.35□□□□□ -1.71
LHX1P48742 RPL23AP87-202ENST00000573039 466 ntBASIC4.35□□□□□ -1.71
LHX1P48742 AC025627.2-201ENST00000576220 160 ntBASIC4.35□□□□□ -1.71
LHX1P48742 AC012417.1-201ENST00000582307 1039 ntBASIC4.35□□□□□ -1.71
LHX1P48742 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.35□□□□□ -1.71
LHX1P48742 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.35□□□□□ -1.71
LHX1P48742 AC090246.1-201ENST00000616499 426 ntBASIC4.35□□□□□ -1.71
LHX1P48742 MIR7154-201ENST00000620673 73 ntBASIC4.35□□□□□ -1.71
LHX1P48742 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.35□□□□□ -1.71
LHX1P48742 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.35□□□□□ -1.71
LHX1P48742 AC099654.8-201ENST00000637757 681 ntBASIC4.35□□□□□ -1.71
LHX1P48742 AL445984.1-201ENST00000637834 659 ntBASIC4.35□□□□□ -1.71
LHX1P48742 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
LHX1P48742 MTCO1P6-201ENST00000481192 1384 ntBASIC4.35□□□□□ -1.71
LHX1P48742 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
LHX1P48742 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
LHX1P48742 AC022893.2-201ENST00000564832 3296 ntBASIC4.34□□□□□ -1.71
LHX1P48742 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
LHX1P48742 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.34□□□□□ -1.71
LHX1P48742 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.34□□□□□ -1.71
LHX1P48742 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.34□□□□□ -1.71
LHX1P48742 RNA5SP283-201ENST00000365604 119 ntBASIC4.34□□□□□ -1.71
LHX1P48742 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.34□□□□□ -1.71
LHX1P48742 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
LHX1P48742 AL603865.2-201ENST00000401679 213 ntBASIC4.34□□□□□ -1.71
LHX1P48742 RPL31P52-201ENST00000407532 367 ntBASIC4.34□□□□□ -1.71
LHX1P48742 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.34□□□□□ -1.71
LHX1P48742 AL158073.1-201ENST00000426848 1104 ntBASIC4.34□□□□□ -1.71
LHX1P48742 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LHX1P48742 UBE2V1P5-201ENST00000440070 405 ntBASIC4.34□□□□□ -1.71
LHX1P48742 RPL21P89-201ENST00000444021 467 ntBASIC4.34□□□□□ -1.71
LHX1P48742 AL929288.2-201ENST00000446368 407 ntBASIC4.34□□□□□ -1.71
LHX1P48742 PTMAP3-201ENST00000447474 330 ntBASIC4.34□□□□□ -1.71
LHX1P48742 AL050341.1-201ENST00000447743 313 ntBASIC4.34□□□□□ -1.71
LHX1P48742 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.34□□□□□ -1.71
LHX1P48742 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.34□□□□□ -1.71
LHX1P48742 STMN1P2-201ENST00000508435 439 ntBASIC4.34□□□□□ -1.71
LHX1P48742 AC139103.1-201ENST00000534696 1030 ntBASIC4.34□□□□□ -1.71
LHX1P48742 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.34□□□□□ -1.71
LHX1P48742 AC006518.2-201ENST00000542513 940 ntBASIC4.34□□□□□ -1.71
LHX1P48742 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.34□□□□□ -1.71
LHX1P48742 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.34□□□□□ -1.71
LHX1P48742 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.34□□□□□ -1.71
LHX1P48742 CYP2C60P-201ENST00000566088 139 ntBASIC4.34□□□□□ -1.71
LHX1P48742 CYP4A43P-201ENST00000568156 121 ntBASIC4.34□□□□□ -1.71
LHX1P48742 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.34□□□□□ -1.71
LHX1P48742 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LHX1P48742 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.34□□□□□ -1.71
LHX1P48742 AC114878.2-201ENST00000604863 1251 ntBASIC4.34□□□□□ -1.71
LHX1P48742 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LHX1P48742 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.34□□□□□ -1.71
LHX1P48742 AC013468.1-201ENST00000608680 598 ntBASIC4.34□□□□□ -1.71
LHX1P48742 AC139713.2-210ENST00000641741 992 ntBASIC4.34□□□□□ -1.71
LHX1P48742 AL627171.1-201ENST00000618845 1308 ntBASIC4.34□□□□□ -1.71
LHX1P48742 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.34□□□□□ -1.71
LHX1P48742 AC119744.1-201ENST00000454746 1715 ntBASIC4.34□□□□□ -1.71
LHX1P48742 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
LHX1P48742 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.72
LHX1P48742 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
LHX1P48742 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LHX1P48742 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
LHX1P48742 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
LHX1P48742 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.33□□□□□ -1.72
LHX1P48742 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LHX1P48742 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.33□□□□□ -1.72
LHX1P48742 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.33□□□□□ -1.72
LHX1P48742 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LHX1P48742 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LHX1P48742 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LHX1P48742 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.33□□□□□ -1.72
LHX1P48742 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.33□□□□□ -1.72
LHX1P48742 AC011155.1-201ENST00000316512 456 ntBASIC4.33□□□□□ -1.72
LHX1P48742 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.33□□□□□ -1.72
LHX1P48742 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.33□□□□□ -1.72
LHX1P48742 AC092638.1-201ENST00000411966 1275 ntBASIC4.33□□□□□ -1.72
LHX1P48742 PGBD4P8-201ENST00000412993 562 ntBASIC4.33□□□□□ -1.72
LHX1P48742 TCEA1P2-201ENST00000420496 906 ntBASIC4.33□□□□□ -1.72
LHX1P48742 OR5BE1P-201ENST00000425977 939 ntBASIC4.33□□□□□ -1.72
LHX1P48742 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.33□□□□□ -1.72
LHX1P48742 RPS20P1-201ENST00000434853 354 ntBASIC4.33□□□□□ -1.72
LHX1P48742 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.33□□□□□ -1.72
LHX1P48742 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.33□□□□□ -1.72
LHX1P48742 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.33□□□□□ -1.72
LHX1P48742 CDC42P1-201ENST00000456658 548 ntBASIC4.33□□□□□ -1.72
LHX1P48742 AL672167.3-201ENST00000465951 960 ntBASIC4.33□□□□□ -1.72
LHX1P48742 RN7SL585P-201ENST00000470538 280 ntBASIC4.33□□□□□ -1.72
LHX1P48742 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms