Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
CXCL12P48061 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CXCL12P48061 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.66□□□□□ -1.82
CXCL12P48061 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.66□□□□□ -1.82
CXCL12P48061 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.66□□□□□ -1.82
CXCL12P48061 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CXCL12P48061 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.66□□□□□ -1.82
CXCL12P48061 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
CXCL12P48061 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CXCL12P48061 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CXCL12P48061 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CXCL12P48061 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CXCL12P48061 MIR365B-201ENST00000362317 111 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 RNA5SP502-201ENST00000362694 119 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 RNU4-23P-201ENST00000362839 140 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 U3.26-201ENST00000391236 204 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 AL122016.1-201ENST00000403365 367 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 LAP3P1-201ENST00000403648 294 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 RPL23AP48-201ENST00000406913 488 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.65□□□□□ -1.83
CXCL12P48061 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.65□□□□□ -1.83
CXCL12P48061 RFESDP1-201ENST00000422350 461 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 UBE2V1P1-201ENST00000430836 445 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 MTCO1P45-201ENST00000431457 267 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.65□□□□□ -1.83
CXCL12P48061 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.65□□□□□ -1.83
CXCL12P48061 HLA-N-201ENST00000437516 135 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.65□□□□□ -1.83
CXCL12P48061 RPS15AP29-201ENST00000445539 400 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.65□□□□□ -1.83
CXCL12P48061 AC005008.1-201ENST00000456151 612 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.65□□□□□ -1.83
CXCL12P48061 AC084198.1-201ENST00000477747 402 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 AC025518.1-201ENST00000479856 347 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 DEFB109F-201ENST00000491870 277 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.65□□□□□ -1.83
CXCL12P48061 RNA5SP208-201ENST00000516156 78 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 SNORA70.18-201ENST00000516696 98 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.65□□□□□ -1.83
CXCL12P48061 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.65□□□□□ -1.83
CXCL12P48061 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.65□□□□□ -1.83
CXCL12P48061 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.65□□□□□ -1.83
CXCL12P48061 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.65□□□□□ -1.83
CXCL12P48061 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CXCL12P48061 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.65□□□□□ -1.83
CXCL12P48061 AC012493.2-201ENST00000595083 291 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.65□□□□□ -1.83
CXCL12P48061 AL592494.3-201ENST00000609485 464 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 AL590410.1-201ENST00000617925 333 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.65□□□□□ -1.83
CXCL12P48061 KPNA2P2-201ENST00000419546 1489 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 LINC02471-203ENST00000641941 4752 ntBASIC3.65□□□□□ -1.83
CXCL12P48061 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.65□□□□□ -1.83
CXCL12P48061 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CXCL12P48061 AC007390.2-201ENST00000606229 3803 ntBASIC3.64□□□□□ -1.83
CXCL12P48061 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CXCL12P48061 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CXCL12P48061 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
CXCL12P48061 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.64□□□□□ -1.83
CXCL12P48061 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CXCL12P48061 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CXCL12P48061 RNU4-35P-201ENST00000362588 141 ntBASIC3.64□□□□□ -1.83
CXCL12P48061 Y_RNA.500-201ENST00000384466 111 ntBASIC3.64□□□□□ -1.83
CXCL12P48061 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CXCL12P48061 AC017083.1-201ENST00000428093 483 ntBASIC3.64□□□□□ -1.83
CXCL12P48061 Z85994.2-201ENST00000434327 452 ntBASIC3.64□□□□□ -1.83
CXCL12P48061 AC006994.1-201ENST00000438212 839 ntBASIC3.64□□□□□ -1.83
CXCL12P48061 RAB28P3-201ENST00000448325 597 ntBASIC3.64□□□□□ -1.83
CXCL12P48061 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.64□□□□□ -1.83
CXCL12P48061 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.64□□□□□ -1.83
CXCL12P48061 BTF3P5-201ENST00000457252 467 ntBASIC3.64□□□□□ -1.83
CXCL12P48061 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.64□□□□□ -1.83
CXCL12P48061 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CXCL12P48061 PPBPP1-201ENST00000510807 373 ntBASIC3.64□□□□□ -1.83
CXCL12P48061 VWA8P1-201ENST00000510889 176 ntBASIC3.64□□□□□ -1.83
CXCL12P48061 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.64□□□□□ -1.83
CXCL12P48061 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.64□□□□□ -1.83
CXCL12P48061 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.64□□□□□ -1.83
CXCL12P48061 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.64□□□□□ -1.83
CXCL12P48061 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.64□□□□□ -1.83
CXCL12P48061 FAM106CP-201ENST00000582212 507 ntBASIC3.64□□□□□ -1.83
CXCL12P48061 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.64□□□□□ -1.83
CXCL12P48061 AC012213.4-201ENST00000606457 354 ntBASIC3.64□□□□□ -1.83
CXCL12P48061 AC015722.2-201ENST00000622210 551 ntBASIC3.64□□□□□ -1.83
CXCL12P48061 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.64□□□□□ -1.83
CXCL12P48061 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.64□□□□□ -1.83
CXCL12P48061 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CXCL12P48061 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.64□□□□□ -1.83
CXCL12P48061 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.64□□□□□ -1.83
CXCL12P48061 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CXCL12P48061 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CXCL12P48061 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CXCL12P48061 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
CXCL12P48061 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CXCL12P48061 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CXCL12P48061 AL024507.1-201ENST00000412741 274 ntBASIC3.63□□□□□ -1.83
CXCL12P48061 HSFY4P-201ENST00000415994 1181 ntBASIC3.63□□□□□ -1.83
CXCL12P48061 AL512649.1-201ENST00000428997 581 ntBASIC3.63□□□□□ -1.83
CXCL12P48061 AC236972.1-201ENST00000433225 199 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms