Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.89□□□□□ -1.79
SLC1A1P43005 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SLC1A1P43005 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SLC1A1P43005 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SLC1A1P43005 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
SLC1A1P43005 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SLC1A1P43005 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.88□□□□□ -1.79
SLC1A1P43005 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.88□□□□□ -1.79
SLC1A1P43005 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SLC1A1P43005 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SLC1A1P43005 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC1A1P43005 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.88□□□□□ -1.79
SLC1A1P43005 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC1A1P43005 AL512504.1-201ENST00000415494 778 ntBASIC3.88□□□□□ -1.79
SLC1A1P43005 AC002075.2-201ENST00000425207 252 ntBASIC3.88□□□□□ -1.79
SLC1A1P43005 OSTCP5-201ENST00000425293 453 ntBASIC3.88□□□□□ -1.79
SLC1A1P43005 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC1A1P43005 HMGB3P5-201ENST00000428894 612 ntBASIC3.88□□□□□ -1.79
SLC1A1P43005 AC006511.1-201ENST00000470614 315 ntBASIC3.88□□□□□ -1.79
SLC1A1P43005 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC1A1P43005 HPRT1P1-201ENST00000509498 657 ntBASIC3.88□□□□□ -1.79
SLC1A1P43005 AC021146.1-201ENST00000511202 716 ntBASIC3.88□□□□□ -1.79
SLC1A1P43005 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC1A1P43005 OR7E13P-201ENST00000526052 910 ntBASIC3.88□□□□□ -1.79
SLC1A1P43005 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.88□□□□□ -1.79
SLC1A1P43005 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC1A1P43005 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.88□□□□□ -1.79
SLC1A1P43005 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.88□□□□□ -1.79
SLC1A1P43005 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.88□□□□□ -1.79
SLC1A1P43005 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC1A1P43005 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.88□□□□□ -1.79
SLC1A1P43005 AC010680.3-201ENST00000604215 520 ntBASIC3.88□□□□□ -1.79
SLC1A1P43005 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.88□□□□□ -1.79
SLC1A1P43005 AC020978.9-201ENST00000624380 1141 ntBASIC3.88□□□□□ -1.79
SLC1A1P43005 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SLC1A1P43005 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SLC1A1P43005 MTCO1P14-201ENST00000441695 1559 ntBASIC3.88□□□□□ -1.79
SLC1A1P43005 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SLC1A1P43005 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SLC1A1P43005 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SLC1A1P43005 AC100871.1-201ENST00000507871 1456 ntBASIC3.87□□□□□ -1.79
SLC1A1P43005 AC024560.2-201ENST00000507981 1497 ntBASIC3.87□□□□□ -1.79
SLC1A1P43005 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SLC1A1P43005 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SLC1A1P43005 MIR372-201ENST00000362225 67 ntBASIC3.87□□□□□ -1.79
SLC1A1P43005 RPL30P2-201ENST00000414021 291 ntBASIC3.87□□□□□ -1.79
SLC1A1P43005 AC244453.4-201ENST00000419150 388 ntBASIC3.87□□□□□ -1.79
SLC1A1P43005 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.87□□□□□ -1.79
SLC1A1P43005 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SLC1A1P43005 USP9YP7-201ENST00000436723 430 ntBASIC3.87□□□□□ -1.79
SLC1A1P43005 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.87□□□□□ -1.79
SLC1A1P43005 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC1A1P43005 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC1A1P43005 RPL7P31-201ENST00000450192 724 ntBASIC3.87□□□□□ -1.79
SLC1A1P43005 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.87□□□□□ -1.79
SLC1A1P43005 USP9YP32-201ENST00000452432 430 ntBASIC3.87□□□□□ -1.79
SLC1A1P43005 HMGB1P26-201ENST00000452520 628 ntBASIC3.87□□□□□ -1.79
SLC1A1P43005 NDUFA5P9-201ENST00000472609 340 ntBASIC3.87□□□□□ -1.79
SLC1A1P43005 AC010683.1-201ENST00000473673 378 ntBASIC3.87□□□□□ -1.79
SLC1A1P43005 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC1A1P43005 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC1A1P43005 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.87□□□□□ -1.79
SLC1A1P43005 AC010460.1-201ENST00000507087 466 ntBASIC3.87□□□□□ -1.79
SLC1A1P43005 NDUFB4P9-201ENST00000511646 388 ntBASIC3.87□□□□□ -1.79
SLC1A1P43005 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.87□□□□□ -1.79
SLC1A1P43005 IGKV2D-10-201ENST00000520194 281 ntBASIC3.87□□□□□ -1.79
SLC1A1P43005 AP000926.4-201ENST00000527351 454 ntBASIC3.87□□□□□ -1.79
SLC1A1P43005 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.87□□□□□ -1.79
SLC1A1P43005 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC1A1P43005 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.87□□□□□ -1.79
SLC1A1P43005 MIR4738-201ENST00000579134 87 ntBASIC3.87□□□□□ -1.79
SLC1A1P43005 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC1A1P43005 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.87□□□□□ -1.79
SLC1A1P43005 AF230666.2-201ENST00000602328 725 ntBASIC3.87□□□□□ -1.79
SLC1A1P43005 AL096803.3-201ENST00000609032 532 ntBASIC3.87□□□□□ -1.79
SLC1A1P43005 FP236240.3-201ENST00000623061 327 ntBASIC3.87□□□□□ -1.79
SLC1A1P43005 AC015726.3-201ENST00000624501 418 ntBASIC3.87□□□□□ -1.79
SLC1A1P43005 AP000553.6-201ENST00000641242 118 ntBASIC3.87□□□□□ -1.79
SLC1A1P43005 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SLC1A1P43005 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC1A1P43005 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SLC1A1P43005 ASNSP1-204ENST00000641977 1664 ntBASIC3.87□□□□□ -1.79
SLC1A1P43005 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SLC1A1P43005 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SLC1A1P43005 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SLC1A1P43005 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SLC1A1P43005 RPL32P3-201ENST00000359025 275 ntBASIC3.86□□□□□ -1.79
SLC1A1P43005 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SLC1A1P43005 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.86□□□□□ -1.79
SLC1A1P43005 SOD2P1-201ENST00000396543 562 ntBASIC3.86□□□□□ -1.79
SLC1A1P43005 AL591419.1-201ENST00000427423 339 ntBASIC3.86□□□□□ -1.79
SLC1A1P43005 MTCO1P57-201ENST00000432182 261 ntBASIC3.86□□□□□ -1.79
SLC1A1P43005 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.86□□□□□ -1.79
SLC1A1P43005 CBX1P4-201ENST00000439415 457 ntBASIC3.86□□□□□ -1.79
SLC1A1P43005 RPS29P31-201ENST00000446147 164 ntBASIC3.86□□□□□ -1.79
SLC1A1P43005 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.86□□□□□ -1.79
SLC1A1P43005 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.86□□□□□ -1.79
SLC1A1P43005 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SLC1A1P43005 UBDP1-202ENST00000457888 382 ntBASIC3.86□□□□□ -1.79
SLC1A1P43005 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms