Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.1□□□□□ -1.91
COL8A2P25067 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.1□□□□□ -1.91
COL8A2P25067 AL645939.1-201ENST00000453429 797 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 AC098824.1-201ENST00000453565 980 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.1□□□□□ -1.91
COL8A2P25067 MTND3P6-201ENST00000485242 339 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
COL8A2P25067 HMGN1P15-201ENST00000513870 295 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 SOD1P3-201ENST00000518682 454 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 DUXAP2-201ENST00000519198 589 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 OR7E13P-201ENST00000526052 910 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.1□□□□□ -1.91
COL8A2P25067 AP000619.3-201ENST00000535634 1127 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 AL121766.1-201ENST00000547436 487 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 AC141257.3-201ENST00000572906 215 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 AC099489.2-201ENST00000574976 260 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 AL163642.2-201ENST00000604722 1019 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.1□□□□□ -1.91
COL8A2P25067 AC019176.2-201ENST00000611579 315 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 AL391261.4-201ENST00000616012 481 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 AL357559.1-201ENST00000622228 274 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL8A2P25067 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
COL8A2P25067 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL8A2P25067 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.1□□□□□ -1.91
COL8A2P25067 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL8A2P25067 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL8A2P25067 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL8A2P25067 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.09□□□□□ -1.91
COL8A2P25067 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
COL8A2P25067 MAPK10-372ENST00000641954 3413 ntBASIC3.09□□□□□ -1.91
COL8A2P25067 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
COL8A2P25067 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
COL8A2P25067 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
COL8A2P25067 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.09□□□□□ -1.91
COL8A2P25067 AC090337.1-201ENST00000579651 2074 ntBASIC3.09□□□□□ -1.91
COL8A2P25067 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
COL8A2P25067 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
COL8A2P25067 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
COL8A2P25067 MIR218-2-201ENST00000385006 110 ntBASIC3.09□□□□□ -1.91
COL8A2P25067 ATP5A1P2-201ENST00000412323 255 ntBASIC3.09□□□□□ -1.91
COL8A2P25067 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.09□□□□□ -1.91
COL8A2P25067 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.09□□□□□ -1.91
COL8A2P25067 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.09□□□□□ -1.91
COL8A2P25067 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.09□□□□□ -1.91
COL8A2P25067 OR6K4P-201ENST00000423179 955 ntBASIC3.09□□□□□ -1.91
COL8A2P25067 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.09□□□□□ -1.91
COL8A2P25067 AC006946.1-201ENST00000429106 328 ntBASIC3.09□□□□□ -1.91
COL8A2P25067 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.09□□□□□ -1.91
COL8A2P25067 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
COL8A2P25067 YWHAQP9-201ENST00000445891 512 ntBASIC3.09□□□□□ -1.91
COL8A2P25067 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
COL8A2P25067 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.09□□□□□ -1.91
COL8A2P25067 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
COL8A2P25067 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.09□□□□□ -1.91
COL8A2P25067 AC110768.1-201ENST00000509222 400 ntBASIC3.09□□□□□ -1.91
COL8A2P25067 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.09□□□□□ -1.91
COL8A2P25067 RNU6-319P-201ENST00000516025 108 ntBASIC3.09□□□□□ -1.91
COL8A2P25067 MIR2114-201ENST00000516645 80 ntBASIC3.09□□□□□ -1.91
COL8A2P25067 IGKV2D-23-201ENST00000518179 286 ntBASIC3.09□□□□□ -1.91
COL8A2P25067 OR5B10P-201ENST00000532869 642 ntBASIC3.09□□□□□ -1.91
COL8A2P25067 OR8X1P-201ENST00000534542 869 ntBASIC3.09□□□□□ -1.91
COL8A2P25067 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.09□□□□□ -1.91
COL8A2P25067 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.09□□□□□ -1.91
COL8A2P25067 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.09□□□□□ -1.91
COL8A2P25067 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.09□□□□□ -1.91
COL8A2P25067 AL049874.4-201ENST00000557593 255 ntBASIC3.09□□□□□ -1.91
COL8A2P25067 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.09□□□□□ -1.91
COL8A2P25067 AC015911.5-201ENST00000587076 451 ntBASIC3.09□□□□□ -1.91
COL8A2P25067 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.09□□□□□ -1.91
COL8A2P25067 AL390816.3-201ENST00000604527 1066 ntBASIC3.09□□□□□ -1.91
COL8A2P25067 BRDTP1-201ENST00000605735 677 ntBASIC3.09□□□□□ -1.91
COL8A2P25067 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.09□□□□□ -1.91
COL8A2P25067 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.09□□□□□ -1.91
COL8A2P25067 OR5AC4P-202ENST00000642086 985 ntBASIC3.09□□□□□ -1.91
COL8A2P25067 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.09□□□□□ -1.91
COL8A2P25067 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.09□□□□□ -1.91
COL8A2P25067 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
COL8A2P25067 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
COL8A2P25067 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.08□□□□□ -1.92
COL8A2P25067 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
COL8A2P25067 AC007823.1-201ENST00000569932 1566 ntBASIC3.08□□□□□ -1.92
COL8A2P25067 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.08□□□□□ -1.92
COL8A2P25067 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.08□□□□□ -1.92
COL8A2P25067 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.08□□□□□ -1.92
COL8A2P25067 OTUD4P1-201ENST00000237841 3067 ntBASIC3.08□□□□□ -1.92
COL8A2P25067 SNORD9-201ENST00000362566 104 ntBASIC3.08□□□□□ -1.92
COL8A2P25067 RNU1-18P-201ENST00000363062 164 ntBASIC3.08□□□□□ -1.92
COL8A2P25067 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.08□□□□□ -1.92
COL8A2P25067 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
COL8A2P25067 RNU2-65P-201ENST00000410162 185 ntBASIC3.08□□□□□ -1.92
COL8A2P25067 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.08□□□□□ -1.92
COL8A2P25067 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.08□□□□□ -1.92
COL8A2P25067 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.08□□□□□ -1.92
COL8A2P25067 CRYBB2P1-203ENST00000415709 538 ntBASIC3.08□□□□□ -1.92
COL8A2P25067 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.08□□□□□ -1.92
COL8A2P25067 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.08□□□□□ -1.92
COL8A2P25067 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.08□□□□□ -1.92
COL8A2P25067 RPS26P47-201ENST00000427219 348 ntBASIC3.08□□□□□ -1.92
COL8A2P25067 IFNNP1-201ENST00000429219 553 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms