Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TNFRSF1BP20333 AC046144.1-201ENST00000478559 1853 ntBASIC4.36□□□□□ -1.71
TNFRSF1BP20333 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TNFRSF1BP20333 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TNFRSF1BP20333 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.36□□□□□ -1.71
TNFRSF1BP20333 AP001273.1-201ENST00000624493 3152 ntBASIC4.36□□□□□ -1.71
TNFRSF1BP20333 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.36□□□□□ -1.71
TNFRSF1BP20333 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.36□□□□□ -1.71
TNFRSF1BP20333 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 MAPK10-303ENST00000641324 3959 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 CASC19-204ENST00000641001 2055 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 RN7SKP95-201ENST00000362860 303 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 RNU4-44P-201ENST00000363050 141 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 U8.4-201ENST00000363626 134 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 SNORA4.1-201ENST00000364263 144 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 OR52E6-202ENST00000379946 954 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 TPMTP3-201ENST00000411928 735 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AC007899.1-201ENST00000412776 775 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AL161449.1-201ENST00000414531 1199 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AC079355.1-201ENST00000421770 223 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AC008072.1-201ENST00000434254 824 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 MTND1P4-201ENST00000435196 415 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AC093155.1-201ENST00000440164 826 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 KATNBL1P6-201ENST00000453433 915 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AC079168.2-201ENST00000453977 416 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 CFTRP1-201ENST00000456646 183 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AC093899.1-201ENST00000457984 376 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AC116337.2-201ENST00000477662 156 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AC004069.2-201ENST00000505438 1114 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AC106872.4-201ENST00000510050 523 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AC079140.3-201ENST00000511111 550 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AC110775.1-201ENST00000513721 462 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 RN7SKP66-201ENST00000516681 231 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 IGKV2D-10-201ENST00000520194 281 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 GTF2IP8-201ENST00000560687 584 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AL390726.5-202ENST00000564800 256 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 ROCK1P1-201ENST00000573767 549 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AC133552.5-201ENST00000604266 540 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 FAM27B-201ENST00000610601 213 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AL355073.2-201ENST00000612106 557 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 MIR7844-201ENST00000616161 122 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AC009509.4-201ENST00000619202 509 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AC074140.1-201ENST00000621617 208 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AC092192.1-201ENST00000633154 1018 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AC099063.3-201ENST00000642066 185 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.35□□□□□ -1.71
TNFRSF1BP20333 NEAT1-202ENST00000501122 22743 ntBASIC4.35□□□□□ -1.71
TNFRSF1BP20333 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TNFRSF1BP20333 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.34□□□□□ -1.71
TNFRSF1BP20333 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TNFRSF1BP20333 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TNFRSF1BP20333 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
TNFRSF1BP20333 RNU6-1119P-201ENST00000384349 108 ntBASIC4.34□□□□□ -1.71
TNFRSF1BP20333 AL161909.1-201ENST00000397390 712 ntBASIC4.34□□□□□ -1.71
TNFRSF1BP20333 MIR1303-201ENST00000408625 86 ntBASIC4.34□□□□□ -1.71
TNFRSF1BP20333 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.34□□□□□ -1.71
TNFRSF1BP20333 FCF1P9-201ENST00000412546 282 ntBASIC4.34□□□□□ -1.71
TNFRSF1BP20333 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.34□□□□□ -1.71
TNFRSF1BP20333 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.34□□□□□ -1.71
TNFRSF1BP20333 CDK8P2-201ENST00000415020 547 ntBASIC4.34□□□□□ -1.71
TNFRSF1BP20333 RPL23AP39-201ENST00000415533 405 ntBASIC4.34□□□□□ -1.71
TNFRSF1BP20333 CHEK2P3-201ENST00000416118 248 ntBASIC4.34□□□□□ -1.71
TNFRSF1BP20333 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.34□□□□□ -1.71
TNFRSF1BP20333 AC114814.2-201ENST00000419195 485 ntBASIC4.34□□□□□ -1.71
TNFRSF1BP20333 MTND4LP11-201ENST00000422184 280 ntBASIC4.34□□□□□ -1.71
TNFRSF1BP20333 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.34□□□□□ -1.71
TNFRSF1BP20333 RPL31P54-201ENST00000429803 370 ntBASIC4.34□□□□□ -1.71
TNFRSF1BP20333 PPIAP13-201ENST00000434706 478 ntBASIC4.34□□□□□ -1.71
TNFRSF1BP20333 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.34□□□□□ -1.71
TNFRSF1BP20333 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.34□□□□□ -1.71
TNFRSF1BP20333 RN7SL591P-201ENST00000496150 292 ntBASIC4.34□□□□□ -1.71
TNFRSF1BP20333 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms