Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ERCC2P18074 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
ERCC2P18074 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ERCC2P18074 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ERCC2P18074 AC126755.2-208ENST00000327792 462 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 AC138969.1-213ENST00000331436 462 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ERCC2P18074 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ERCC2P18074 AL161909.1-201ENST00000397390 712 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 SFR1P1-201ENST00000403720 688 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 RPL7P27-201ENST00000403775 720 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.33□□□□□ -1.72
ERCC2P18074 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.33□□□□□ -1.72
ERCC2P18074 RPS12P23-201ENST00000419579 400 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 CHIAP3-201ENST00000423668 1133 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 AC234779.1-201ENST00000425910 285 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.33□□□□□ -1.72
ERCC2P18074 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.33□□□□□ -1.72
ERCC2P18074 RPL36P19-201ENST00000430744 301 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.33□□□□□ -1.72
ERCC2P18074 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.33□□□□□ -1.72
ERCC2P18074 MTCYBP15-201ENST00000433123 1127 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 AC010881.1-201ENST00000433830 235 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.33□□□□□ -1.72
ERCC2P18074 RPL23AP89-201ENST00000439324 255 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.33□□□□□ -1.72
ERCC2P18074 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
ERCC2P18074 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.33□□□□□ -1.72
ERCC2P18074 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 AC091167.1-201ENST00000492017 396 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 PARP4P3-201ENST00000510265 317 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 AC006499.6-201ENST00000511169 607 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.33□□□□□ -1.72
ERCC2P18074 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.33□□□□□ -1.72
ERCC2P18074 RNU6-488P-201ENST00000515918 99 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.33□□□□□ -1.72
ERCC2P18074 ZNF971P-201ENST00000562068 1249 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.33□□□□□ -1.72
ERCC2P18074 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ERCC2P18074 RPAP2P1-201ENST00000603626 1168 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 AC010680.3-201ENST00000604215 520 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.33□□□□□ -1.72
ERCC2P18074 RNU6-1192P-201ENST00000612197 107 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 RNU6-489P-201ENST00000618289 107 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.33□□□□□ -1.72
ERCC2P18074 MIR3653-201ENST00000625572 110 ntBASIC4.33□□□□□ -1.72
ERCC2P18074 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
ERCC2P18074 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
ERCC2P18074 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ERCC2P18074 AC138393.1-206ENST00000540997 1886 ntBASIC4.32□□□□□ -1.72
ERCC2P18074 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ERCC2P18074 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.32□□□□□ -1.72
ERCC2P18074 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ERCC2P18074 AC111188.2-201ENST00000529697 1387 ntBASIC4.32□□□□□ -1.72
ERCC2P18074 FAM3C2-201ENST00000312214 681 ntBASIC4.32□□□□□ -1.72
ERCC2P18074 RNU1-94P-201ENST00000362627 173 ntBASIC4.32□□□□□ -1.72
ERCC2P18074 RN7SKP182-201ENST00000410772 298 ntBASIC4.32□□□□□ -1.72
ERCC2P18074 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.32□□□□□ -1.72
ERCC2P18074 AC016712.1-201ENST00000431088 378 ntBASIC4.32□□□□□ -1.72
ERCC2P18074 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.32□□□□□ -1.72
ERCC2P18074 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.32□□□□□ -1.72
ERCC2P18074 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.32□□□□□ -1.72
ERCC2P18074 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.32□□□□□ -1.72
ERCC2P18074 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.32□□□□□ -1.72
ERCC2P18074 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.32□□□□□ -1.72
ERCC2P18074 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.32□□□□□ -1.72
ERCC2P18074 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ERCC2P18074 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.32□□□□□ -1.72
ERCC2P18074 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.32□□□□□ -1.72
ERCC2P18074 AC109327.1-201ENST00000471666 403 ntBASIC4.32□□□□□ -1.72
ERCC2P18074 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.32□□□□□ -1.72
ERCC2P18074 AF213884.1-201ENST00000488102 463 ntBASIC4.32□□□□□ -1.72
ERCC2P18074 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.32□□□□□ -1.72
ERCC2P18074 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.32□□□□□ -1.72
ERCC2P18074 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.32□□□□□ -1.72
ERCC2P18074 AC108475.1-201ENST00000507880 950 ntBASIC4.32□□□□□ -1.72
ERCC2P18074 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.32□□□□□ -1.72
ERCC2P18074 AC105233.3-201ENST00000531125 744 ntBASIC4.32□□□□□ -1.72
ERCC2P18074 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.32□□□□□ -1.72
ERCC2P18074 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.32□□□□□ -1.72
ERCC2P18074 AC063950.1-201ENST00000552036 308 ntBASIC4.32□□□□□ -1.72
ERCC2P18074 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ERCC2P18074 AF129408.1-201ENST00000608767 431 ntBASIC4.32□□□□□ -1.72
ERCC2P18074 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.32□□□□□ -1.72
ERCC2P18074 AC067852.7-201ENST00000623270 535 ntBASIC4.32□□□□□ -1.72
ERCC2P18074 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ERCC2P18074 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
ERCC2P18074 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.32□□□□□ -1.72
ERCC2P18074 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ERCC2P18074 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ERCC2P18074 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.32□□□□□ -1.72
ERCC2P18074 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ERCC2P18074 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.31□□□□□ -1.72
ERCC2P18074 AL133243.3-201ENST00000617415 3004 ntBASIC4.31□□□□□ -1.72
ERCC2P18074 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.31□□□□□ -1.72
ERCC2P18074 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.31□□□□□ -1.72
ERCC2P18074 DCAF13P3-201ENST00000561147 1334 ntBASIC4.31□□□□□ -1.72
ERCC2P18074 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms