Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC8.07□□□□□ -1.12
CD44P16070 NDUFB4P11-201ENST00000560510 395 ntBASIC8.07□□□□□ -1.12
CD44P16070 RN7SL25P-201ENST00000583862 260 ntBASIC8.07□□□□□ -1.12
CD44P16070 RPS4XP21-201ENST00000603814 750 ntBASIC8.07□□□□□ -1.12
CD44P16070 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC8.07□□□□□ -1.12
CD44P16070 AL512652.1-201ENST00000619006 500 ntBASIC8.07□□□□□ -1.12
CD44P16070 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC8.07□□□□□ -1.12
CD44P16070 AP004289.1-201ENST00000436307 2205 ntBASIC8.07□□□□□ -1.12
CD44P16070 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CD44P16070 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CD44P16070 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
CD44P16070 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC8.07□□□□□ -1.12
CD44P16070 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
CD44P16070 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CD44P16070 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC8.07□□□□□ -1.12
CD44P16070 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
CD44P16070 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
CD44P16070 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC8.07□□□□□ -1.12
CD44P16070 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
CD44P16070 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC8.06□□□□□ -1.12
CD44P16070 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CD44P16070 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC8.06□□□□□ -1.12
CD44P16070 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CD44P16070 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CD44P16070 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CD44P16070 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CD44P16070 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CD44P16070 OR10D1P-201ENST00000355343 936 ntBASIC8.06□□□□□ -1.12
CD44P16070 Y_RNA.23-201ENST00000362496 106 ntBASIC8.06□□□□□ -1.12
CD44P16070 SNORA20-201ENST00000384662 132 ntBASIC8.06□□□□□ -1.12
CD44P16070 MIR614-201ENST00000385082 90 ntBASIC8.06□□□□□ -1.12
CD44P16070 SNORA12.1-201ENST00000390873 148 ntBASIC8.06□□□□□ -1.12
CD44P16070 RPL21P75-201ENST00000396599 483 ntBASIC8.06□□□□□ -1.12
CD44P16070 RPL21P28-201ENST00000401418 483 ntBASIC8.06□□□□□ -1.12
CD44P16070 MIR1204-201ENST00000408388 67 ntBASIC8.06□□□□□ -1.12
CD44P16070 RNY4P29-201ENST00000410801 97 ntBASIC8.06□□□□□ -1.12
CD44P16070 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC8.06□□□□□ -1.12
CD44P16070 AC008753.1-201ENST00000423096 284 ntBASIC8.06□□□□□ -1.12
CD44P16070 AL590556.1-201ENST00000423231 483 ntBASIC8.06□□□□□ -1.12
CD44P16070 AC092066.1-201ENST00000425131 317 ntBASIC8.06□□□□□ -1.12
CD44P16070 AC006946.1-201ENST00000429106 328 ntBASIC8.06□□□□□ -1.12
CD44P16070 RPL21P11-201ENST00000461458 483 ntBASIC8.06□□□□□ -1.12
CD44P16070 RPL21P39-201ENST00000463605 483 ntBASIC8.06□□□□□ -1.12
CD44P16070 RN7SL160P-201ENST00000468558 284 ntBASIC8.06□□□□□ -1.12
CD44P16070 AC093591.1-201ENST00000491435 481 ntBASIC8.06□□□□□ -1.12
CD44P16070 RPL21P16-201ENST00000495531 483 ntBASIC8.06□□□□□ -1.12
CD44P16070 SNX18P24-201ENST00000505249 671 ntBASIC8.06□□□□□ -1.12
CD44P16070 RPL7L1P7-201ENST00000509986 724 ntBASIC8.06□□□□□ -1.12
CD44P16070 AC027801.3-201ENST00000515049 698 ntBASIC8.06□□□□□ -1.12
CD44P16070 SNORA25.12-201ENST00000516202 82 ntBASIC8.06□□□□□ -1.12
CD44P16070 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC8.06□□□□□ -1.12
CD44P16070 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
CD44P16070 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC8.06□□□□□ -1.12
CD44P16070 AL049794.2-201ENST00000616301 365 ntBASIC8.06□□□□□ -1.12
CD44P16070 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC8.06□□□□□ -1.12
CD44P16070 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CD44P16070 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CD44P16070 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CD44P16070 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
CD44P16070 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
CD44P16070 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CD44P16070 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CD44P16070 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
CD44P16070 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CD44P16070 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
CD44P16070 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CD44P16070 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CD44P16070 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CD44P16070 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
CD44P16070 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
CD44P16070 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CD44P16070 AC133552.3-201ENST00000572236 1869 ntBASIC8.05□□□□□ -1.12
CD44P16070 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CD44P16070 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CD44P16070 RNA5SP238-201ENST00000365464 120 ntBASIC8.05□□□□□ -1.12
CD44P16070 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CD44P16070 RNU6-921P-201ENST00000384361 107 ntBASIC8.05□□□□□ -1.12
CD44P16070 Y_RNA.571-201ENST00000384753 98 ntBASIC8.05□□□□□ -1.12
CD44P16070 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
CD44P16070 SNORA26.2-201ENST00000390922 122 ntBASIC8.05□□□□□ -1.12
CD44P16070 GLULP6-201ENST00000399502 913 ntBASIC8.05□□□□□ -1.12
CD44P16070 AL390729.2-201ENST00000416137 156 ntBASIC8.05□□□□□ -1.12
CD44P16070 AC008280.1-201ENST00000418851 412 ntBASIC8.05□□□□□ -1.12
CD44P16070 AC073069.1-201ENST00000428657 441 ntBASIC8.05□□□□□ -1.12
CD44P16070 HBBP1-201ENST00000433329 439 ntBASIC8.05□□□□□ -1.12
CD44P16070 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC8.05□□□□□ -1.12
CD44P16070 SEPT7P4-201ENST00000437076 306 ntBASIC8.05□□□□□ -1.12
CD44P16070 PPIAP10-201ENST00000438675 458 ntBASIC8.05□□□□□ -1.12
CD44P16070 PRELID1P3-201ENST00000450055 643 ntBASIC8.05□□□□□ -1.12
CD44P16070 AC007395.1-201ENST00000451333 677 ntBASIC8.05□□□□□ -1.12
CD44P16070 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC8.05□□□□□ -1.12
CD44P16070 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC8.05□□□□□ -1.12
CD44P16070 TFP1-201ENST00000460564 572 ntTSL 4 BASIC8.05□□□□□ -1.12
CD44P16070 HMGN2P13-201ENST00000476476 274 ntBASIC8.05□□□□□ -1.12
CD44P16070 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC8.05□□□□□ -1.12
CD44P16070 AC117383.2-201ENST00000514722 322 ntBASIC8.05□□□□□ -1.12
CD44P16070 RNU5E-3P-201ENST00000515913 68 ntBASIC8.05□□□□□ -1.12
CD44P16070 RNU6-65P-201ENST00000516332 98 ntBASIC8.05□□□□□ -1.12
CD44P16070 CYCSP22-201ENST00000517555 339 ntBASIC8.05□□□□□ -1.12
CD44P16070 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms