Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.33□□□□□ -1.4
HOXD8P13378 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXD8P13378 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXD8P13378 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
HOXD8P13378 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXD8P13378 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXD8P13378 AL034546.1-201ENST00000623740 3693 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HOXD8P13378 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
HOXD8P13378 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
HOXD8P13378 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXD8P13378 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HOXD8P13378 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXD8P13378 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
HOXD8P13378 MAPK10-270ENST00000641102 3538 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 RLIMP2-201ENST00000427891 1563 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXD8P13378 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HOXD8P13378 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXD8P13378 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXD8P13378 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXD8P13378 AC073365.1-203ENST00000641055 1992 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 U3.7-201ENST00000363668 216 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXD8P13378 RNU1-149P-201ENST00000390870 161 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
HOXD8P13378 AP000534.2-201ENST00000412729 568 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 SNRPFP1-201ENST00000414761 252 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXD8P13378 AL606489.2-201ENST00000433886 234 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 AL136380.1-201ENST00000447970 162 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 RPSAP51-201ENST00000497462 645 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 SRP72-202ENST00000504757 745 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXD8P13378 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXD8P13378 RNA5SP116-201ENST00000516132 98 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 BTF3P12-201ENST00000519620 469 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXD8P13378 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXD8P13378 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXD8P13378 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXD8P13378 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC6.32□□□□□ -1.4
HOXD8P13378 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXD8P13378 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXD8P13378 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXD8P13378 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.32□□□□□ -1.4
HOXD8P13378 AC006116.10-201ENST00000591836 581 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 AC012616.1-201ENST00000600294 197 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 AL355802.3-201ENST00000607571 545 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 AC078899.5-201ENST00000612475 178 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 AC040896.1-201ENST00000613819 479 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 MIR7973-1-201ENST00000614683 76 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 AC009248.2-201ENST00000619826 254 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 AC068831.8-201ENST00000620171 435 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 MIR6837-201ENST00000620884 64 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 AC132068.1-201ENST00000623805 459 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXD8P13378 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HOXD8P13378 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXD8P13378 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
HOXD8P13378 AL592429.1-201ENST00000403909 1473 ntBASIC6.32□□□□□ -1.4
HOXD8P13378 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXD8P13378 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXD8P13378 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXD8P13378 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HOXD8P13378 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXD8P13378 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXD8P13378 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
HOXD8P13378 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.31□□□□□ -1.4
HOXD8P13378 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
HOXD8P13378 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HOXD8P13378 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HOXD8P13378 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
HOXD8P13378 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.31□□□□□ -1.4
HOXD8P13378 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HOXD8P13378 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HOXD8P13378 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HOXD8P13378 AL121950.1-201ENST00000624993 2077 ntBASIC6.31□□□□□ -1.4
HOXD8P13378 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HOXD8P13378 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HOXD8P13378 RNA5SP319-201ENST00000362768 119 ntBASIC6.31□□□□□ -1.4
HOXD8P13378 RNU6-1151P-201ENST00000384684 107 ntBASIC6.31□□□□□ -1.4
HOXD8P13378 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HOXD8P13378 RPL23AP32-201ENST00000395315 459 ntBASIC6.31□□□□□ -1.4
HOXD8P13378 AL136131.1-201ENST00000406079 803 ntBASIC6.31□□□□□ -1.4
HOXD8P13378 SPTLC1P2-201ENST00000407089 121 ntBASIC6.31□□□□□ -1.4
HOXD8P13378 MIR548P-201ENST00000408336 84 ntBASIC6.31□□□□□ -1.4
HOXD8P13378 RNU4-34P-201ENST00000410431 124 ntBASIC6.31□□□□□ -1.4
HOXD8P13378 ELOCP4-201ENST00000420090 333 ntBASIC6.31□□□□□ -1.4
HOXD8P13378 AC073069.1-201ENST00000428657 441 ntBASIC6.31□□□□□ -1.4
HOXD8P13378 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HOXD8P13378 AC024082.2-201ENST00000434771 238 ntBASIC6.31□□□□□ -1.4
HOXD8P13378 CYCSP12-201ENST00000437729 300 ntBASIC6.31□□□□□ -1.4
HOXD8P13378 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.31□□□□□ -1.4
HOXD8P13378 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC6.31□□□□□ -1.4
HOXD8P13378 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.31□□□□□ -1.4
HOXD8P13378 Y_RNA.632-201ENST00000459189 102 ntBASIC6.31□□□□□ -1.4
HOXD8P13378 RPS23P2-201ENST00000463671 415 ntBASIC6.31□□□□□ -1.4
HOXD8P13378 RPS3AP50-201ENST00000487064 803 ntBASIC6.31□□□□□ -1.4
HOXD8P13378 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC6.31□□□□□ -1.4
HOXD8P13378 RNU6-835P-201ENST00000516974 104 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms