Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RNA5SP322-201ENST00000363617 119 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 RPL23AP59-201ENST00000399415 461 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 AL355615.1-201ENST00000406187 641 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 RPS16P5-201ENST00000406501 404 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 RNA5SP36-201ENST00000410197 133 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 AC092745.2-202ENST00000411880 369 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 NRBF2P2-201ENST00000413087 861 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.87□□□□□ -1.79
MT-ND1P03886 AL590139.1-201ENST00000416267 400 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 NUP35P2-201ENST00000416748 943 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.87□□□□□ -1.79
MT-ND1P03886 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.87□□□□□ -1.79
MT-ND1P03886 TCEA1P2-201ENST00000420496 906 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.87□□□□□ -1.79
MT-ND1P03886 OR5AW1P-201ENST00000426334 1006 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.87□□□□□ -1.79
MT-ND1P03886 RPL23AP1-201ENST00000428990 471 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 AC092809.1-201ENST00000441469 474 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.87□□□□□ -1.79
MT-ND1P03886 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.87□□□□□ -1.79
MT-ND1P03886 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.87□□□□□ -1.79
MT-ND1P03886 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.87□□□□□ -1.79
MT-ND1P03886 RPL37P6-202ENST00000464216 403 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 AC146944.2-203ENST00000502493 354 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.87□□□□□ -1.79
MT-ND1P03886 AC139495.1-202ENST00000513164 354 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 AC010342.1-201ENST00000514047 877 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.87□□□□□ -1.79
MT-ND1P03886 RNA5SP143-201ENST00000516936 115 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 RN7SKP96-201ENST00000516948 297 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 IGLVIV-65-201ENST00000517313 360 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.87□□□□□ -1.79
MT-ND1P03886 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.87□□□□□ -1.79
MT-ND1P03886 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.87□□□□□ -1.79
MT-ND1P03886 AC083923.1-201ENST00000523708 376 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 AC139103.1-201ENST00000534696 1030 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.87□□□□□ -1.79
MT-ND1P03886 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.87□□□□□ -1.79
MT-ND1P03886 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.87□□□□□ -1.79
MT-ND1P03886 RPL23AP87-202ENST00000573039 466 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.87□□□□□ -1.79
MT-ND1P03886 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MT-ND1P03886 HMGB1P50-201ENST00000605814 607 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.87□□□□□ -1.79
MT-ND1P03886 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.87□□□□□ -1.79
MT-ND1P03886 AC124016.2-201ENST00000610058 665 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 AC022960.3-201ENST00000619794 441 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 AP003476.1-201ENST00000623984 516 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.87□□□□□ -1.79
MT-ND1P03886 AL031985.3-201ENST00000565390 2449 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 MTCO1P14-201ENST00000441695 1559 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 AC006504.1-201ENST00000562493 3666 ntBASIC3.87□□□□□ -1.79
MT-ND1P03886 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
MT-ND1P03886 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MT-ND1P03886 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.87□□□□□ -1.79
MT-ND1P03886 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
MT-ND1P03886 FAM35DP-201ENST00000323387 2712 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.86□□□□□ -1.79
MT-ND1P03886 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
MT-ND1P03886 NMD3P1-201ENST00000439704 1488 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
MT-ND1P03886 AC025031.4-201ENST00000621248 3271 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
MT-ND1P03886 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
MT-ND1P03886 RNU6-543P-201ENST00000362576 108 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 RNA5SP502-201ENST00000362694 119 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
MT-ND1P03886 SNORA51.12-201ENST00000384448 134 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
MT-ND1P03886 DNAJC19P6-201ENST00000401853 280 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 AC096533.1-201ENST00000411645 353 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 FAR2P2-201ENST00000413041 594 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.86□□□□□ -1.79
MT-ND1P03886 AL157831.1-201ENST00000426134 473 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.86□□□□□ -1.79
MT-ND1P03886 ETF1P3-201ENST00000430422 1160 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 FTH1P6-201ENST00000430768 320 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 RPS7P2-201ENST00000435134 607 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 AL772161.1-201ENST00000439130 476 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 AL356535.1-201ENST00000440335 398 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 AL645638.1-201ENST00000440519 361 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.86□□□□□ -1.79
MT-ND1P03886 PHBP16-201ENST00000446318 950 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.86□□□□□ -1.79
MT-ND1P03886 AL096803.2-201ENST00000450032 677 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 PPIAP3-201ENST00000450588 505 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.86□□□□□ -1.79
MT-ND1P03886 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.86□□□□□ -1.79
MT-ND1P03886 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.86□□□□□ -1.79
MT-ND1P03886 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.86□□□□□ -1.79
MT-ND1P03886 AF213884.1-201ENST00000488102 463 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
MT-ND1P03886 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
MT-ND1P03886 SUMO2P5-201ENST00000506790 245 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 IGBP1P5-201ENST00000507524 1000 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.86□□□□□ -1.79
MT-ND1P03886 RNA5SP73-201ENST00000516744 108 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 RN7SKP92-201ENST00000517266 244 ntBASIC3.86□□□□□ -1.79
MT-ND1P03886 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms