Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHRNA1P02708 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CHRNA1P02708 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CHRNA1P02708 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.26□□□□□ -1.73
CHRNA1P02708 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHRNA1P02708 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHRNA1P02708 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CHRNA1P02708 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHRNA1P02708 RPL7AP73-201ENST00000413490 353 ntBASIC4.26□□□□□ -1.73
CHRNA1P02708 RAC1P3-201ENST00000416129 580 ntBASIC4.26□□□□□ -1.73
CHRNA1P02708 RPS24P8-201ENST00000431490 402 ntBASIC4.26□□□□□ -1.73
CHRNA1P02708 MTCO1P52-201ENST00000433928 531 ntBASIC4.26□□□□□ -1.73
CHRNA1P02708 MTND5P8-201ENST00000449817 1083 ntBASIC4.26□□□□□ -1.73
CHRNA1P02708 RPL7P49-201ENST00000471402 708 ntBASIC4.26□□□□□ -1.73
CHRNA1P02708 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.26□□□□□ -1.73
CHRNA1P02708 AC006499.6-201ENST00000511169 607 ntBASIC4.26□□□□□ -1.73
CHRNA1P02708 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.26□□□□□ -1.73
CHRNA1P02708 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.26□□□□□ -1.73
CHRNA1P02708 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.26□□□□□ -1.73
CHRNA1P02708 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.26□□□□□ -1.73
CHRNA1P02708 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.26□□□□□ -1.73
CHRNA1P02708 AP000619.3-201ENST00000535634 1127 ntBASIC4.26□□□□□ -1.73
CHRNA1P02708 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.26□□□□□ -1.73
CHRNA1P02708 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.26□□□□□ -1.73
CHRNA1P02708 AC124068.1-201ENST00000563131 678 ntBASIC4.26□□□□□ -1.73
CHRNA1P02708 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.26□□□□□ -1.73
CHRNA1P02708 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.26□□□□□ -1.73
CHRNA1P02708 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.26□□□□□ -1.73
CHRNA1P02708 OR1AB1P-201ENST00000585564 761 ntBASIC4.26□□□□□ -1.73
CHRNA1P02708 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CHRNA1P02708 AC104662.1-201ENST00000604448 511 ntBASIC4.26□□□□□ -1.73
CHRNA1P02708 AC055764.2-201ENST00000610089 670 ntBASIC4.26□□□□□ -1.73
CHRNA1P02708 AL139089.1-201ENST00000620372 975 ntBASIC4.26□□□□□ -1.73
CHRNA1P02708 AC095038.2-201ENST00000621464 1070 ntBASIC4.26□□□□□ -1.73
CHRNA1P02708 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.26□□□□□ -1.73
CHRNA1P02708 MTCO1P14-201ENST00000441695 1559 ntBASIC4.26□□□□□ -1.73
CHRNA1P02708 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CHRNA1P02708 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CHRNA1P02708 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHRNA1P02708 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHRNA1P02708 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CHRNA1P02708 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
CHRNA1P02708 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CHRNA1P02708 XIAPP3-201ENST00000312918 795 ntBASIC4.25□□□□□ -1.73
CHRNA1P02708 SNORD74.4-201ENST00000364129 80 ntBASIC4.25□□□□□ -1.73
CHRNA1P02708 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CHRNA1P02708 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHRNA1P02708 MIR513A2-201ENST00000385249 127 ntBASIC4.25□□□□□ -1.73
CHRNA1P02708 AC007066.1-201ENST00000392902 381 ntBASIC4.25□□□□□ -1.73
CHRNA1P02708 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CHRNA1P02708 MIR1251-201ENST00000408552 70 ntBASIC4.25□□□□□ -1.73
CHRNA1P02708 SNORA3C-201ENST00000408792 125 ntBASIC4.25□□□□□ -1.73
CHRNA1P02708 AC068533.1-201ENST00000418542 415 ntBASIC4.25□□□□□ -1.73
CHRNA1P02708 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.25□□□□□ -1.73
CHRNA1P02708 RANP8-201ENST00000444720 713 ntBASIC4.25□□□□□ -1.73
CHRNA1P02708 HMGB1P5-202ENST00000451497 985 ntBASIC4.25□□□□□ -1.73
CHRNA1P02708 PRSS3P4-201ENST00000453323 162 ntBASIC4.25□□□□□ -1.73
CHRNA1P02708 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.25□□□□□ -1.73
CHRNA1P02708 RN7SL585P-201ENST00000470538 280 ntBASIC4.25□□□□□ -1.73
CHRNA1P02708 AC093663.2-201ENST00000484625 313 ntBASIC4.25□□□□□ -1.73
CHRNA1P02708 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.25□□□□□ -1.73
CHRNA1P02708 AC026726.1-201ENST00000512859 601 ntBASIC4.25□□□□□ -1.73
CHRNA1P02708 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.25□□□□□ -1.73
CHRNA1P02708 IGHV3-32-201ENST00000519182 355 ntBASIC4.25□□□□□ -1.73
CHRNA1P02708 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.25□□□□□ -1.73
CHRNA1P02708 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.25□□□□□ -1.73
CHRNA1P02708 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.25□□□□□ -1.73
CHRNA1P02708 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.25□□□□□ -1.73
CHRNA1P02708 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.25□□□□□ -1.73
CHRNA1P02708 RFPL1S-203ENST00000539579 330 ntBASIC4.25□□□□□ -1.73
CHRNA1P02708 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.25□□□□□ -1.73
CHRNA1P02708 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.25□□□□□ -1.73
CHRNA1P02708 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.25□□□□□ -1.73
CHRNA1P02708 RN7SL339P-201ENST00000580597 296 ntBASIC4.25□□□□□ -1.73
CHRNA1P02708 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.25□□□□□ -1.73
CHRNA1P02708 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.25□□□□□ -1.73
CHRNA1P02708 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHRNA1P02708 AC015726.3-201ENST00000624501 418 ntBASIC4.25□□□□□ -1.73
CHRNA1P02708 AC116563.2-201ENST00000624751 535 ntBASIC4.25□□□□□ -1.73
CHRNA1P02708 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CHRNA1P02708 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CHRNA1P02708 AC008725.1-201ENST00000605123 2263 ntBASIC4.25□□□□□ -1.73
CHRNA1P02708 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.25□□□□□ -1.73
CHRNA1P02708 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHRNA1P02708 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CHRNA1P02708 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CHRNA1P02708 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHRNA1P02708 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.24□□□□□ -1.73
CHRNA1P02708 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CHRNA1P02708 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHRNA1P02708 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.24□□□□□ -1.73
CHRNA1P02708 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CHRNA1P02708 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
CHRNA1P02708 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CHRNA1P02708 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.24□□□□□ -1.73
CHRNA1P02708 ATP5F1P4-201ENST00000397288 746 ntBASIC4.24□□□□□ -1.73
CHRNA1P02708 RPL31P52-201ENST00000407532 367 ntBASIC4.24□□□□□ -1.73
CHRNA1P02708 AL035423.1-201ENST00000420331 213 ntBASIC4.24□□□□□ -1.73
CHRNA1P02708 MTND4LP7-201ENST00000431728 294 ntBASIC4.24□□□□□ -1.73
CHRNA1P02708 BX119904.1-201ENST00000432026 348 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms