Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 U1.1-201ENST00000384101 164 ntBASIC3.21□□□□□ -1.9
HLA-DQB1P01920 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HLA-DQB1P01920 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HLA-DQB1P01920 RNA5SP498-201ENST00000411342 120 ntBASIC3.21□□□□□ -1.9
HLA-DQB1P01920 AC126124.2-201ENST00000413542 321 ntBASIC3.21□□□□□ -1.9
HLA-DQB1P01920 CR848007.2-201ENST00000424918 787 ntBASIC3.21□□□□□ -1.9
HLA-DQB1P01920 COX6CP15-201ENST00000426313 211 ntBASIC3.21□□□□□ -1.9
HLA-DQB1P01920 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DQB1P01920 MRPL50P1-201ENST00000431951 384 ntBASIC3.21□□□□□ -1.9
HLA-DQB1P01920 RSL24D1P8-201ENST00000434442 492 ntBASIC3.21□□□□□ -1.9
HLA-DQB1P01920 B3GNT2P1-201ENST00000434960 952 ntBASIC3.21□□□□□ -1.9
HLA-DQB1P01920 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DQB1P01920 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DQB1P01920 RPS15AP29-201ENST00000445539 400 ntBASIC3.21□□□□□ -1.9
HLA-DQB1P01920 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DQB1P01920 AL645939.1-201ENST00000453429 797 ntBASIC3.21□□□□□ -1.9
HLA-DQB1P01920 TPRKBP1-201ENST00000456243 481 ntBASIC3.21□□□□□ -1.9
HLA-DQB1P01920 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DQB1P01920 RPS29P22-201ENST00000472363 168 ntBASIC3.21□□□□□ -1.9
HLA-DQB1P01920 AC105137.1-201ENST00000484355 562 ntBASIC3.21□□□□□ -1.9
HLA-DQB1P01920 AC007686.1-201ENST00000488511 463 ntBASIC3.21□□□□□ -1.9
HLA-DQB1P01920 MTCO1P31-201ENST00000506355 492 ntBASIC3.21□□□□□ -1.9
HLA-DQB1P01920 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DQB1P01920 SMARCE1P4-201ENST00000523647 241 ntBASIC3.21□□□□□ -1.9
HLA-DQB1P01920 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DQB1P01920 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DQB1P01920 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DQB1P01920 AC006960.3-201ENST00000561845 705 ntBASIC3.21□□□□□ -1.9
HLA-DQB1P01920 AL845331.3-202ENST00000562856 261 ntBASIC3.21□□□□□ -1.9
HLA-DQB1P01920 AL391834.1-201ENST00000609609 560 ntBASIC3.21□□□□□ -1.9
HLA-DQB1P01920 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DQB1P01920 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DQB1P01920 AC022149.2-201ENST00000621061 203 ntBASIC3.21□□□□□ -1.9
HLA-DQB1P01920 AC073530.2-201ENST00000623987 261 ntBASIC3.21□□□□□ -1.9
HLA-DQB1P01920 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DQB1P01920 AL732372.2-225ENST00000642124 456 ntBASIC3.21□□□□□ -1.9
HLA-DQB1P01920 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DQB1P01920 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
HLA-DQB1P01920 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DQB1P01920 AC007529.1-201ENST00000418574 2178 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DQB1P01920 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DQB1P01920 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HLA-DQB1P01920 SNORD6-201ENST00000365444 73 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DQB1P01920 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DQB1P01920 AL583834.1-201ENST00000406943 343 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 RNU4-74P-201ENST00000411280 161 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 HMGB3P20-201ENST00000417997 600 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DQB1P01920 AL592293.2-201ENST00000422292 996 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 AP000907.1-201ENST00000428428 510 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DQB1P01920 AC068287.1-201ENST00000430283 295 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DQB1P01920 EIF2S2P2-201ENST00000447161 982 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DQB1P01920 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DQB1P01920 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DQB1P01920 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DQB1P01920 RPS23P7-201ENST00000466210 444 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DQB1P01920 MTND6P6-201ENST00000478031 263 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 AC107398.1-201ENST00000486904 505 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DQB1P01920 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DQB1P01920 RNA5SP380-201ENST00000517190 98 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 HMGB1P46-201ENST00000520062 610 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 AC068657.1-201ENST00000520807 306 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DQB1P01920 AP003730.1-201ENST00000524605 285 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DQB1P01920 AC051619.2-201ENST00000559063 397 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 AC022884.3-201ENST00000579571 248 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 RN7SL600P-201ENST00000581811 299 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 PSMA6P4-201ENST00000603247 718 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 SNORA62.6-201ENST00000606322 83 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 AC103710.3-201ENST00000608157 948 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 AL357559.1-201ENST00000622228 274 ntBASIC3.2□□□□□ -1.9
HLA-DQB1P01920 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DQB1P01920 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HLA-DQB1P01920 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DQB1P01920 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
HLA-DQB1P01920 AC068647.1-201ENST00000489539 2265 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 RNU6-185P-201ENST00000384421 107 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 MIR92A2-201ENST00000385299 75 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 MTHFD2P2-201ENST00000407725 247 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AC010385.1-201ENST00000412374 256 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms