Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF40O75150 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RNF40O75150 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
RNF40O75150 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.24□□□□□ -1.25
RNF40O75150 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RNF40O75150 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RNF40O75150 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
RNF40O75150 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.24□□□□□ -1.25
RNF40O75150 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF40O75150 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF40O75150 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
RNF40O75150 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF40O75150 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RNF40O75150 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF40O75150 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
RNF40O75150 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF40O75150 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF40O75150 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF40O75150 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF40O75150 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF40O75150 RNA5SP152-201ENST00000365184 110 ntBASIC7.23□□□□□ -1.25
RNF40O75150 Y_RNA.428-201ENST00000384078 102 ntBASIC7.23□□□□□ -1.25
RNF40O75150 RNU6-662P-201ENST00000384253 104 ntBASIC7.23□□□□□ -1.25
RNF40O75150 EIF4E2P1-201ENST00000393781 255 ntBASIC7.23□□□□□ -1.25
RNF40O75150 AL391417.1-201ENST00000404100 426 ntBASIC7.23□□□□□ -1.25
RNF40O75150 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF40O75150 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF40O75150 RPS15AP30-201ENST00000420976 390 ntBASIC7.23□□□□□ -1.25
RNF40O75150 ACTR3BP6-201ENST00000422332 1241 ntBASIC7.23□□□□□ -1.25
RNF40O75150 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC7.23□□□□□ -1.25
RNF40O75150 AL606753.1-201ENST00000427435 87 ntBASIC7.23□□□□□ -1.25
RNF40O75150 MED13P1-201ENST00000428342 171 ntBASIC7.23□□□□□ -1.25
RNF40O75150 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC7.23□□□□□ -1.25
RNF40O75150 MTND4LP30-201ENST00000454092 297 ntBASIC7.23□□□□□ -1.25
RNF40O75150 RPL34P34-201ENST00000465389 354 ntBASIC7.23□□□□□ -1.25
RNF40O75150 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC7.23□□□□□ -1.25
RNF40O75150 AC098818.1-201ENST00000478593 252 ntBASIC7.23□□□□□ -1.25
RNF40O75150 AC109481.1-201ENST00000509173 282 ntBASIC7.23□□□□□ -1.25
RNF40O75150 AC116337.1-201ENST00000509680 687 ntBASIC7.23□□□□□ -1.25
RNF40O75150 HIGD1AP13-201ENST00000509878 289 ntBASIC7.23□□□□□ -1.25
RNF40O75150 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.23□□□□□ -1.25
RNF40O75150 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.23□□□□□ -1.25
RNF40O75150 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC7.23□□□□□ -1.25
RNF40O75150 AC092375.1-201ENST00000550410 637 ntBASIC7.23□□□□□ -1.25
RNF40O75150 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7.23□□□□□ -1.25
RNF40O75150 AL591767.3-201ENST00000554632 525 ntBASIC7.23□□□□□ -1.25
RNF40O75150 AL031176.1-201ENST00000604554 466 ntBASIC7.23□□□□□ -1.25
RNF40O75150 AC111186.1-201ENST00000604684 130 ntBASIC7.23□□□□□ -1.25
RNF40O75150 AL390877.1-201ENST00000605704 214 ntBASIC7.23□□□□□ -1.25
RNF40O75150 AP001486.3-201ENST00000615334 372 ntBASIC7.23□□□□□ -1.25
RNF40O75150 NAA60-237ENST00000615865 326 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF40O75150 AC132825.6-201ENST00000638861 357 ntBASIC7.23□□□□□ -1.25
RNF40O75150 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.23□□□□□ -1.25
RNF40O75150 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF40O75150 AL359854.1-201ENST00000614203 1594 ntBASIC7.23□□□□□ -1.25
RNF40O75150 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.23□□□□□ -1.25
RNF40O75150 AC009120.2-204ENST00000621548 2032 ntBASIC7.23□□□□□ -1.25
RNF40O75150 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF40O75150 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF40O75150 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC7.23□□□□□ -1.25
RNF40O75150 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF40O75150 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF40O75150 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF40O75150 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
RNF40O75150 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.22□□□□□ -1.25
RNF40O75150 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF40O75150 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF40O75150 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
RNF40O75150 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
RNF40O75150 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.22□□□□□ -1.25
RNF40O75150 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF40O75150 AC007159.1-201ENST00000566529 4706 ntBASIC7.22□□□□□ -1.25
RNF40O75150 DHX40P1-201ENST00000588725 1412 ntBASIC7.22□□□□□ -1.25
RNF40O75150 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RNF40O75150 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF40O75150 Y_RNA.150-201ENST00000363562 102 ntBASIC7.22□□□□□ -1.25
RNF40O75150 RN7SKP191-201ENST00000364713 306 ntBASIC7.22□□□□□ -1.25
RNF40O75150 Y_RNA.477-201ENST00000384352 108 ntBASIC7.22□□□□□ -1.25
RNF40O75150 Y_RNA.485-201ENST00000384395 102 ntBASIC7.22□□□□□ -1.25
RNF40O75150 MIR621-201ENST00000384919 96 ntBASIC7.22□□□□□ -1.25
RNF40O75150 RNU6-1055P-201ENST00000391085 107 ntBASIC7.22□□□□□ -1.25
RNF40O75150 RPSAP60-201ENST00000415403 880 ntBASIC7.22□□□□□ -1.25
RNF40O75150 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.22□□□□□ -1.25
RNF40O75150 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.22□□□□□ -1.25
RNF40O75150 SUMO2P3-201ENST00000438311 288 ntBASIC7.22□□□□□ -1.25
RNF40O75150 AL031681.1-201ENST00000443304 400 ntBASIC7.22□□□□□ -1.25
RNF40O75150 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC7.22□□□□□ -1.25
RNF40O75150 PRELID3BP1-201ENST00000457142 540 ntBASIC7.22□□□□□ -1.25
RNF40O75150 SNRPFP3-201ENST00000457792 225 ntBASIC7.22□□□□□ -1.25
RNF40O75150 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.22□□□□□ -1.25
RNF40O75150 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.22□□□□□ -1.25
RNF40O75150 UOX-201ENST00000471089 899 ntBASIC7.22□□□□□ -1.25
RNF40O75150 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
RNF40O75150 Y_RNA.670-201ENST00000516255 105 ntBASIC7.22□□□□□ -1.25
RNF40O75150 Y_RNA.708-201ENST00000516950 96 ntBASIC7.22□□□□□ -1.25
RNF40O75150 RNU6-255P-201ENST00000516957 105 ntBASIC7.22□□□□□ -1.25
RNF40O75150 COX6B1P6-201ENST00000522347 255 ntBASIC7.22□□□□□ -1.25
RNF40O75150 IGHV3-76-201ENST00000522465 295 ntBASIC7.22□□□□□ -1.25
RNF40O75150 AC068993.1-201ENST00000546724 589 ntBASIC7.22□□□□□ -1.25
RNF40O75150 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms