Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.45□□□□□ -1.86
SGCEO43556 AC006270.2-201ENST00000578523 652 ntBASIC3.45□□□□□ -1.86
SGCEO43556 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.45□□□□□ -1.86
SGCEO43556 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.45□□□□□ -1.86
SGCEO43556 AC020910.2-201ENST00000603635 610 ntBASIC3.45□□□□□ -1.86
SGCEO43556 AC091167.4-201ENST00000605079 184 ntBASIC3.45□□□□□ -1.86
SGCEO43556 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.45□□□□□ -1.86
SGCEO43556 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.45□□□□□ -1.86
SGCEO43556 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SGCEO43556 AC138649.5-201ENST00000637456 137 ntBASIC3.45□□□□□ -1.86
SGCEO43556 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SGCEO43556 NMD3P1-201ENST00000439704 1488 ntBASIC3.45□□□□□ -1.86
SGCEO43556 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
SGCEO43556 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SGCEO43556 UBE3AP2-201ENST00000429033 2259 ntBASIC3.45□□□□□ -1.86
SGCEO43556 SYT14P1-202ENST00000600441 1448 ntBASIC3.44□□□□□ -1.86
SGCEO43556 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SGCEO43556 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SGCEO43556 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SGCEO43556 AL021368.2-201ENST00000606125 5352 ntBASIC3.44□□□□□ -1.86
SGCEO43556 AC000367.1-201ENST00000452711 1766 ntBASIC3.44□□□□□ -1.86
SGCEO43556 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SGCEO43556 AC004987.3-201ENST00000413879 771 ntBASIC3.44□□□□□ -1.86
SGCEO43556 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.44□□□□□ -1.86
SGCEO43556 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.44□□□□□ -1.86
SGCEO43556 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.44□□□□□ -1.86
SGCEO43556 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.44□□□□□ -1.86
SGCEO43556 Z99127.2-201ENST00000441426 334 ntBASIC3.44□□□□□ -1.86
SGCEO43556 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.44□□□□□ -1.86
SGCEO43556 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.44□□□□□ -1.86
SGCEO43556 CFTRP1-201ENST00000456646 183 ntBASIC3.44□□□□□ -1.86
SGCEO43556 RPL37P3-201ENST00000456825 293 ntBASIC3.44□□□□□ -1.86
SGCEO43556 RPL21P11-201ENST00000461458 483 ntBASIC3.44□□□□□ -1.86
SGCEO43556 AC078785.3-201ENST00000476607 425 ntBASIC3.44□□□□□ -1.86
SGCEO43556 RPL5P23-201ENST00000496040 868 ntBASIC3.44□□□□□ -1.86
SGCEO43556 OR4A12P-201ENST00000530847 918 ntBASIC3.44□□□□□ -1.86
SGCEO43556 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.44□□□□□ -1.86
SGCEO43556 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.44□□□□□ -1.86
SGCEO43556 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
SGCEO43556 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SGCEO43556 PCNAP1-202ENST00000595299 752 ntBASIC3.44□□□□□ -1.86
SGCEO43556 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.44□□□□□ -1.86
SGCEO43556 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.44□□□□□ -1.86
SGCEO43556 AL592295.2-201ENST00000612578 206 ntBASIC3.44□□□□□ -1.86
SGCEO43556 AC245389.2-201ENST00000616023 576 ntBASIC3.44□□□□□ -1.86
SGCEO43556 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SGCEO43556 AC243756.2-201ENST00000618406 463 ntBASIC3.44□□□□□ -1.86
SGCEO43556 AC242843.1-201ENST00000618702 573 ntBASIC3.44□□□□□ -1.86
SGCEO43556 U6.98-201ENST00000637157 84 ntBASIC3.44□□□□□ -1.86
SGCEO43556 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.44□□□□□ -1.86
SGCEO43556 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SGCEO43556 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SGCEO43556 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
SGCEO43556 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SGCEO43556 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SGCEO43556 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SGCEO43556 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
SGCEO43556 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SGCEO43556 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.43□□□□□ -1.86
SGCEO43556 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SGCEO43556 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SGCEO43556 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.43□□□□□ -1.86
SGCEO43556 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SGCEO43556 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SGCEO43556 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SGCEO43556 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SGCEO43556 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.43□□□□□ -1.86
SGCEO43556 EI24P2-201ENST00000397776 1076 ntBASIC3.43□□□□□ -1.86
SGCEO43556 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.43□□□□□ -1.86
SGCEO43556 RNA5SP317-201ENST00000410176 116 ntBASIC3.43□□□□□ -1.86
SGCEO43556 RNA5SP311-201ENST00000411290 116 ntBASIC3.43□□□□□ -1.86
SGCEO43556 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.43□□□□□ -1.86
SGCEO43556 AC127526.1-201ENST00000417526 366 ntBASIC3.43□□□□□ -1.86
SGCEO43556 AL160175.1-201ENST00000428124 247 ntBASIC3.43□□□□□ -1.86
SGCEO43556 IFNNP1-201ENST00000429219 553 ntBASIC3.43□□□□□ -1.86
SGCEO43556 ATP5HP2-201ENST00000433885 485 ntBASIC3.43□□□□□ -1.86
SGCEO43556 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.43□□□□□ -1.86
SGCEO43556 TBCAP1-201ENST00000436520 327 ntBASIC3.43□□□□□ -1.86
SGCEO43556 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.43□□□□□ -1.86
SGCEO43556 RPL34P26-201ENST00000445636 354 ntBASIC3.43□□□□□ -1.86
SGCEO43556 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.43□□□□□ -1.86
SGCEO43556 RN7SL93P-201ENST00000463035 293 ntBASIC3.43□□□□□ -1.86
SGCEO43556 TMED11P-201ENST00000479478 690 ntBASIC3.43□□□□□ -1.86
SGCEO43556 AC078817.1-201ENST00000492623 435 ntBASIC3.43□□□□□ -1.86
SGCEO43556 RPL7P24-201ENST00000493052 752 ntBASIC3.43□□□□□ -1.86
SGCEO43556 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.43□□□□□ -1.86
SGCEO43556 AC110792.2-201ENST00000510278 224 ntBASIC3.43□□□□□ -1.86
SGCEO43556 MTCO1P30-201ENST00000515244 580 ntBASIC3.43□□□□□ -1.86
SGCEO43556 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.43□□□□□ -1.86
SGCEO43556 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.43□□□□□ -1.86
SGCEO43556 RNA5SP315-201ENST00000516340 116 ntBASIC3.43□□□□□ -1.86
SGCEO43556 RNA5SP312-201ENST00000517068 116 ntBASIC3.43□□□□□ -1.86
SGCEO43556 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.43□□□□□ -1.86
SGCEO43556 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.43□□□□□ -1.86
SGCEO43556 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.43□□□□□ -1.86
SGCEO43556 MTND5P21-201ENST00000531961 522 ntBASIC3.43□□□□□ -1.86
SGCEO43556 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.43□□□□□ -1.86
SGCEO43556 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.43□□□□□ -1.86
SGCEO43556 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.43□□□□□ -1.86
SGCEO43556 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms