Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.97□□□□□ -1.77
LRRTM2O43300 USP9YP32-201ENST00000452432 430 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.97□□□□□ -1.77
LRRTM2O43300 RPL5P32-201ENST00000454085 879 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 DHFRP3-201ENST00000455595 559 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.97□□□□□ -1.77
LRRTM2O43300 AC087385.1-201ENST00000475062 312 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 AC092045.1-201ENST00000495716 1231 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 SNX5P1-201ENST00000505757 1041 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 RNU6-334P-201ENST00000517072 102 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.97□□□□□ -1.77
LRRTM2O43300 CIR1P1-201ENST00000524055 1133 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.97□□□□□ -1.77
LRRTM2O43300 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.97□□□□□ -1.77
LRRTM2O43300 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.97□□□□□ -1.77
LRRTM2O43300 AP000919.1-202ENST00000581139 1264 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.97□□□□□ -1.77
LRRTM2O43300 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.97□□□□□ -1.77
LRRTM2O43300 DNAJC19P3-201ENST00000594491 331 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 AC025946.2-201ENST00000603398 234 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 Z98200.1-201ENST00000607298 470 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 uc_338.32-201ENST00000615087 172 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 MIR8059-201ENST00000620427 81 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 MIR4727-201ENST00000622232 55 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
LRRTM2O43300 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRRTM2O43300 AC017007.4-201ENST00000503353 1352 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 LARP1BP1-201ENST00000506036 1359 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LRRTM2O43300 MTND5P11-201ENST00000511037 1812 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRRTM2O43300 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRRTM2O43300 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRRTM2O43300 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
LRRTM2O43300 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.96□□□□□ -1.77
LRRTM2O43300 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.96□□□□□ -1.77
LRRTM2O43300 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.96□□□□□ -1.77
LRRTM2O43300 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.96□□□□□ -1.78
LRRTM2O43300 AC022031.1-201ENST00000585985 2593 ntBASIC3.96□□□□□ -1.78
LRRTM2O43300 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LRRTM2O43300 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
LRRTM2O43300 RPL22P22-201ENST00000395439 379 ntBASIC3.96□□□□□ -1.78
LRRTM2O43300 PTMAP2-201ENST00000397627 327 ntBASIC3.96□□□□□ -1.78
LRRTM2O43300 RNA5SP39-201ENST00000411245 120 ntBASIC3.96□□□□□ -1.78
LRRTM2O43300 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.96□□□□□ -1.78
LRRTM2O43300 LINC01347-201ENST00000417964 355 ntBASIC3.96□□□□□ -1.78
LRRTM2O43300 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.96□□□□□ -1.78
LRRTM2O43300 PNRC2P1-201ENST00000423940 420 ntBASIC3.96□□□□□ -1.78
LRRTM2O43300 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.96□□□□□ -1.78
LRRTM2O43300 PTP4A1P3-201ENST00000433661 420 ntBASIC3.96□□□□□ -1.78
LRRTM2O43300 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.96□□□□□ -1.78
LRRTM2O43300 AL158053.1-201ENST00000441503 453 ntBASIC3.96□□□□□ -1.78
LRRTM2O43300 AC069540.1-201ENST00000446320 988 ntBASIC3.96□□□□□ -1.78
LRRTM2O43300 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LRRTM2O43300 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.96□□□□□ -1.78
LRRTM2O43300 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
LRRTM2O43300 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.96□□□□□ -1.78
LRRTM2O43300 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LRRTM2O43300 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.96□□□□□ -1.78
LRRTM2O43300 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.96□□□□□ -1.78
LRRTM2O43300 HNRNPKP5-201ENST00000515300 253 ntBASIC3.96□□□□□ -1.78
LRRTM2O43300 SNORA31.13-201ENST00000516624 135 ntBASIC3.96□□□□□ -1.78
LRRTM2O43300 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.96□□□□□ -1.78
LRRTM2O43300 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.96□□□□□ -1.78
LRRTM2O43300 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LRRTM2O43300 POLR2KP1-201ENST00000553226 168 ntBASIC3.96□□□□□ -1.78
LRRTM2O43300 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.96□□□□□ -1.78
LRRTM2O43300 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.96□□□□□ -1.78
LRRTM2O43300 AC133794.1-201ENST00000602731 914 ntBASIC3.96□□□□□ -1.78
LRRTM2O43300 AC068790.5-201ENST00000602741 355 ntBASIC3.96□□□□□ -1.78
LRRTM2O43300 SUMO2P14-201ENST00000604488 293 ntBASIC3.96□□□□□ -1.78
LRRTM2O43300 AL392112.1-201ENST00000605115 829 ntBASIC3.96□□□□□ -1.78
LRRTM2O43300 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.96□□□□□ -1.78
LRRTM2O43300 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.96□□□□□ -1.78
LRRTM2O43300 MIR6075-201ENST00000620782 95 ntBASIC3.96□□□□□ -1.78
LRRTM2O43300 AC010872.1-201ENST00000624225 675 ntBASIC3.96□□□□□ -1.78
LRRTM2O43300 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.96□□□□□ -1.78
LRRTM2O43300 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.96□□□□□ -1.78
LRRTM2O43300 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.96□□□□□ -1.78
LRRTM2O43300 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LRRTM2O43300 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LRRTM2O43300 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LRRTM2O43300 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.96□□□□□ -1.78
LRRTM2O43300 AC008725.1-201ENST00000605123 2263 ntBASIC3.96□□□□□ -1.78
LRRTM2O43300 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRRTM2O43300 MFSD8-213ENST00000641134 1327 ntBASIC3.95□□□□□ -1.78
LRRTM2O43300 AL049737.1-201ENST00000413920 1403 ntBASIC3.95□□□□□ -1.78
LRRTM2O43300 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRRTM2O43300 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
LRRTM2O43300 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRRTM2O43300 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRRTM2O43300 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRRTM2O43300 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRRTM2O43300 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.95□□□□□ -1.78
LRRTM2O43300 MARK2P15-201ENST00000432204 2186 ntBASIC3.95□□□□□ -1.78
LRRTM2O43300 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRRTM2O43300 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRRTM2O43300 AC095050.2-201ENST00000510748 1458 ntBASIC3.95□□□□□ -1.78
LRRTM2O43300 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRRTM2O43300 SNORA70.4-201ENST00000365509 134 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms