Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC6.13□□□□□ -1.43
SOX1O00570 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC6.13□□□□□ -1.43
SOX1O00570 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.13□□□□□ -1.43
SOX1O00570 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.13□□□□□ -1.43
SOX1O00570 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC6.13□□□□□ -1.43
SOX1O00570 AC020765.1-201ENST00000604296 328 ntBASIC6.13□□□□□ -1.43
SOX1O00570 AL133255.1-201ENST00000606374 441 ntBASIC6.13□□□□□ -1.43
SOX1O00570 AC116312.1-201ENST00000606841 314 ntBASIC6.13□□□□□ -1.43
SOX1O00570 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC6.13□□□□□ -1.43
SOX1O00570 AL603758.1-201ENST00000618654 241 ntBASIC6.13□□□□□ -1.43
SOX1O00570 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SOX1O00570 CLCA3P-203ENST00000490028 2781 ntBASIC6.13□□□□□ -1.43
SOX1O00570 AC005332.9-201ENST00000620266 2921 ntBASIC6.13□□□□□ -1.43
SOX1O00570 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC6.13□□□□□ -1.43
SOX1O00570 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SOX1O00570 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SOX1O00570 LINC00622-201ENST00000562811 1570 ntBASIC6.13□□□□□ -1.43
SOX1O00570 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SOX1O00570 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SOX1O00570 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.13□□□□□ -1.43
SOX1O00570 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SOX1O00570 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SOX1O00570 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SOX1O00570 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.13□□□□□ -1.43
SOX1O00570 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.13□□□□□ -1.43
SOX1O00570 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SOX1O00570 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SOX1O00570 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SOX1O00570 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.12□□□□□ -1.43
SOX1O00570 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SOX1O00570 RNU6-289P-201ENST00000364093 107 ntBASIC6.12□□□□□ -1.43
SOX1O00570 IARS-201ENST00000375627 697 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX1O00570 RNU6-317P-201ENST00000384031 107 ntBASIC6.12□□□□□ -1.43
SOX1O00570 SNORA67-201ENST00000384423 137 ntBASIC6.12□□□□□ -1.43
SOX1O00570 MIR23B-201ENST00000384832 97 ntBASIC6.12□□□□□ -1.43
SOX1O00570 MIR606-201ENST00000384851 96 ntBASIC6.12□□□□□ -1.43
SOX1O00570 AC008171.1-201ENST00000395058 200 ntBASIC6.12□□□□□ -1.43
SOX1O00570 AC233981.1-201ENST00000423224 461 ntBASIC6.12□□□□□ -1.43
SOX1O00570 AC099677.3-201ENST00000427081 395 ntBASIC6.12□□□□□ -1.43
SOX1O00570 RLIMP2-201ENST00000427891 1563 ntBASIC6.12□□□□□ -1.43
SOX1O00570 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX1O00570 RPS24P8-201ENST00000431490 402 ntBASIC6.12□□□□□ -1.43
SOX1O00570 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC6.12□□□□□ -1.43
SOX1O00570 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.12□□□□□ -1.43
SOX1O00570 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC6.12□□□□□ -1.43
SOX1O00570 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.12□□□□□ -1.43
SOX1O00570 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX1O00570 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX1O00570 RPL21P71-201ENST00000465598 459 ntBASIC6.12□□□□□ -1.43
SOX1O00570 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SOX1O00570 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SOX1O00570 INTS6P1-201ENST00000504674 2530 ntBASIC6.12□□□□□ -1.43
SOX1O00570 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.12□□□□□ -1.43
SOX1O00570 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX1O00570 OR7H2P-201ENST00000513483 306 ntBASIC6.12□□□□□ -1.43
SOX1O00570 RNU7-30P-201ENST00000516835 62 ntBASIC6.12□□□□□ -1.43
SOX1O00570 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SOX1O00570 AC008562.1-201ENST00000521763 330 ntBASIC6.12□□□□□ -1.43
SOX1O00570 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX1O00570 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.12□□□□□ -1.43
SOX1O00570 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX1O00570 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SOX1O00570 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.12□□□□□ -1.43
SOX1O00570 AL391262.1-201ENST00000556558 1992 ntBASIC6.12□□□□□ -1.43
SOX1O00570 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.12□□□□□ -1.43
SOX1O00570 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SOX1O00570 AC015818.6-201ENST00000584274 634 ntBASIC6.12□□□□□ -1.43
SOX1O00570 AC012616.1-201ENST00000600294 197 ntBASIC6.12□□□□□ -1.43
SOX1O00570 AC113139.1-201ENST00000605049 239 ntBASIC6.12□□□□□ -1.43
SOX1O00570 RMST_7.1-201ENST00000621935 268 ntBASIC6.12□□□□□ -1.43
SOX1O00570 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.12□□□□□ -1.43
SOX1O00570 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.12□□□□□ -1.43
SOX1O00570 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SOX1O00570 OR52B5P-204ENST00000641744 3467 ntBASIC6.12□□□□□ -1.43
SOX1O00570 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SOX1O00570 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SOX1O00570 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX1O00570 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX1O00570 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX1O00570 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SOX1O00570 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX1O00570 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SOX1O00570 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX1O00570 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX1O00570 ZNF736P3Y-201ENST00000428264 1465 ntBASIC6.11□□□□□ -1.43
SOX1O00570 AL355488.2-201ENST00000609909 2850 ntBASIC6.11□□□□□ -1.43
SOX1O00570 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX1O00570 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX1O00570 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SOX1O00570 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX1O00570 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SOX1O00570 RPS4XP8-201ENST00000402039 771 ntBASIC6.11□□□□□ -1.43
SOX1O00570 AL354719.1-201ENST00000406535 843 ntBASIC6.11□□□□□ -1.43
SOX1O00570 MIR1193-201ENST00000408109 78 ntBASIC6.11□□□□□ -1.43
SOX1O00570 RN7SKP140-201ENST00000411196 284 ntBASIC6.11□□□□□ -1.43
SOX1O00570 AL133482.1-201ENST00000415988 498 ntBASIC6.11□□□□□ -1.43
SOX1O00570 AC013429.2-201ENST00000418798 781 ntBASIC6.11□□□□□ -1.43
SOX1O00570 MTCO3P46-201ENST00000425787 232 ntBASIC6.11□□□□□ -1.43
SOX1O00570 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC6.11□□□□□ -1.43
SOX1O00570 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms