Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 BDH2P1-201ENST00000602288 736 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AC091057.2-201ENST00000602594 792 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 DUXAP4-201ENST00000603046 613 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AL589674.2-201ENST00000604304 337 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 RPL23AP88-201ENST00000605759 454 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 MIR6732-201ENST00000619365 60 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AC010809.3-201ENST00000621310 641 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AC112200.1-201ENST00000625015 234 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 RNA5SP196-201ENST00000625967 102 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 Z83843.1-201ENST00000604070 3685 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AL161431.1-201ENST00000618966 4205 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 RNA5SP183-201ENST00000362452 119 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 RNU1-109P-201ENST00000383960 147 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 MIR659-201ENST00000384963 97 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 MIR223-201ENST00000385204 110 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 MIR431-201ENST00000385266 114 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AL357075.1-201ENST00000404107 726 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 RN7SKP235-201ENST00000410662 305 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 RPS6P14-201ENST00000425165 719 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 OR8F1P-201ENST00000425243 930 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AC008065.1-201ENST00000428525 348 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 SCP2-206ENST00000430330 938 ntTSL 2 BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 ISCA1P2-201ENST00000438679 421 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 RPL23AP58-201ENST00000440453 469 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 RPL29P29-201ENST00000448725 423 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 RPL31P15-201ENST00000449770 338 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 NECAP1P2-201ENST00000455668 727 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 RN7SL75P-201ENST00000461926 281 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 RPL21P126-201ENST00000470049 478 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 RN7SL459P-201ENST00000481078 302 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AC118282.1-201ENST00000506408 765 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AC093824.1-201ENST00000508796 343 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AC119751.1-201ENST00000513357 765 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 SNORA70.19-201ENST00000516717 90 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 RNU6-826P-201ENST00000516827 104 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AC006960.3-201ENST00000561845 705 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AC012146.2-201ENST00000576545 416 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 FAM27D1-201ENST00000612308 341 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AC004696.1-201ENST00000614345 607 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AC091046.2-201ENST00000620775 665 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AC011944.2-201ENST00000624440 683 ntBASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC1.93□□□□□ -2.1
CHKB-CPT1BH3BT56 AC093831.2-201ENST00000624393 3427 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 TMSB4XP4-201ENST00000323496 618 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 RNA5SP191-201ENST00000362585 102 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 RNA5SP97-201ENST00000365006 84 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 LSM5-205ENST00000409952 687 ntTSL 4 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 LSM5-206ENST00000409987 504 ntTSL 5 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 RN7SKP182-201ENST00000410772 298 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 RNU2-71P-201ENST00000411395 189 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 AC068533.1-201ENST00000418542 415 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 SAR1AP4-201ENST00000429225 591 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms