Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AC068714.1-201ENST00000559623 800 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AC079171.1-201ENST00000568788 914 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AC012254.4-201ENST00000588843 273 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AC026741.1-201ENST00000605892 482 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 OR2BH1P-201ENST00000608850 864 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 RMST_10.1-201ENST00000616309 154 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AP000943.4-201ENST00000622912 357 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AP002001.2-201ENST00000529025 1469 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AC009313.2-201ENST00000417893 1941 ntBASIC4.09□□□□□ -1.76
NEDD8-MDP1E9PL57 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.09□□□□□ -1.76
NEDD8-MDP1E9PL57 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 RNA5SP52-201ENST00000362448 134 ntBASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 RNA5SP399-201ENST00000364003 117 ntBASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 SNORA62.2-201ENST00000364672 152 ntBASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 AL133412.1-201ENST00000380194 2992 ntBASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 AC013404.1-201ENST00000413068 249 ntBASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 HMGB3P31-201ENST00000413333 595 ntBASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 MTCO1P43-201ENST00000431831 488 ntBASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 MARK2P15-201ENST00000432204 2186 ntBASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 SDR42E1P3-201ENST00000438345 502 ntBASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 AL353093.1-201ENST00000441292 436 ntBASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 MTND1P6-201ENST00000523621 946 ntBASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 BX005019.1-201ENST00000561881 1810 ntBASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 OR1AB1P-201ENST00000585564 761 ntBASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 DNAJC19P3-201ENST00000594491 331 ntBASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 AC078899.5-201ENST00000612475 178 ntBASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 MIR7973-1-201ENST00000614683 76 ntBASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 FP236240.3-201ENST00000623061 327 ntBASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NEDD8-MDP1E9PL57 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 PNPT1P2-201ENST00000456768 2050 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AL136520.1-201ENST00000600311 1322 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 RNA5SP97-201ENST00000365006 84 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 MIR30B-201ENST00000384850 88 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 RPL22P22-201ENST00000395439 379 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 PTMAP2-201ENST00000397627 327 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 Z97055.1-201ENST00000419730 712 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AL389915.1-201ENST00000422463 466 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 HIGD1AP4-201ENST00000430194 280 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AL035246.1-201ENST00000433554 1255 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AC006994.1-201ENST00000438212 839 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 ELOCP10-201ENST00000440624 327 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 FABP3P2-201ENST00000453169 399 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 RNU6-1218P-201ENST00000458990 108 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AC008379.1-201ENST00000463655 464 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AC006517.1-201ENST00000480485 328 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 PPBPP1-201ENST00000510807 373 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AC090819.1-201ENST00000523800 1111 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AP003102.1-201ENST00000525638 661 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AP002812.4-201ENST00000532139 286 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 ZNF92P3-201ENST00000596594 954 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms