Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 RNU6-1279P-201ENST00000383917 103 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 MIR184-201ENST00000384962 84 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AL356057.1-202ENST00000402263 756 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AC073464.3-201ENST00000422564 712 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AC093084.1-201ENST00000424233 687 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 RPL23AP4-201ENST00000427757 463 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 MTND4LP14-201ENST00000429447 288 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AC092013.1-201ENST00000438795 332 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AL157884.3-201ENST00000448273 1184 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 RPL5P32-201ENST00000454085 879 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 MTND2P30-201ENST00000456663 382 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AC022034.3-201ENST00000471393 478 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AC103987.1-201ENST00000473394 348 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AC117525.1-201ENST00000515228 503 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 SNORD116-26-201ENST00000516006 96 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 RNU6-1102P-201ENST00000516149 96 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 RNU6-889P-201ENST00000517189 103 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 RFPL1S-203ENST00000539579 330 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AC023161.2-201ENST00000551218 780 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 MIR4425-201ENST00000580572 84 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AL133445.2-201ENST00000611191 527 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AC016717.3-201ENST00000624730 554 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 AL356317.1-201ENST00000396110 1436 ntBASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM49D1C9J1S8 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 AC009501.3-201ENST00000605001 1352 ntBASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 PNPT1P2-201ENST00000456768 2050 ntBASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 AC007656.2-201ENST00000624902 4547 ntBASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 AL121657.1-201ENST00000327215 531 ntBASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 RNU6-213P-201ENST00000384051 104 ntBASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 RPS26P8-201ENST00000393490 348 ntBASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 MTHFD2P2-201ENST00000407725 247 ntBASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 PTGES3P2-201ENST00000407942 482 ntBASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 SETD6P1-201ENST00000444575 317 ntBASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 CCRL1P1-201ENST00000449542 1053 ntBASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 AL353718.1-201ENST00000451028 517 ntBASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 MRPS31P2-201ENST00000451581 518 ntBASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 UBDP1-202ENST00000457888 382 ntBASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 OR9M1P-201ENST00000459641 921 ntBASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 RPL7P19-201ENST00000469948 618 ntBASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 LARP7P4-201ENST00000481075 878 ntBASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 ACTG1P13-201ENST00000486987 1043 ntBASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 FTH1P21-201ENST00000512179 511 ntBASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 RNU6-467P-201ENST00000517027 110 ntBASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 NOP56P3-201ENST00000549457 385 ntBASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms