Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 PARP4P2-201ENST00000446672 3326 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 RN7SKP184-201ENST00000362348 333 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 Y_RNA.128-201ENST00000363391 112 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 RN7SKP221-201ENST00000410420 301 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AC004987.3-201ENST00000413879 771 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AL672212.1-201ENST00000422246 400 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 MTCYBP8-201ENST00000422855 651 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 MRPS21P2-201ENST00000424704 264 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AC079807.1-201ENST00000429993 481 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AC108734.1-201ENST00000439549 399 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AL161722.1-201ENST00000446972 1032 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 OR7E116P-201ENST00000448529 957 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AC005297.2-201ENST00000450430 606 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 SDC4P-201ENST00000453285 601 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 GMFBP1-201ENST00000467831 427 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 RN7SL326P-201ENST00000477493 296 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 CR383656.1-201ENST00000484916 377 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 KLHL2P1-201ENST00000508691 521 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AC105417.1-201ENST00000514691 285 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 RNA5SP418-201ENST00000515951 117 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 RNU6-1170P-201ENST00000515974 106 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 SCARNA24.1-201ENST00000516465 137 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 Y_RNA.710-201ENST00000516975 110 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 SETP2-201ENST00000553886 926 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AC010287.1-201ENST00000566916 357 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AC105224.1-201ENST00000587055 421 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AC006115.2-201ENST00000596823 202 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AL355802.3-201ENST00000607571 545 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AC093838.1-201ENST00000613014 469 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AC244100.4-201ENST00000617747 388 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 MTND5P3-201ENST00000438536 1800 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AL118496.1-201ENST00000440201 1812 ntBASIC5.27□□□□□ -1.57
SHISA3A0PJX4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHISA3A0PJX4 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHISA3A0PJX4 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHISA3A0PJX4 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHISA3A0PJX4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.26□□□□□ -1.57
SHISA3A0PJX4 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHISA3A0PJX4 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
SHISA3A0PJX4 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.26□□□□□ -1.57
SHISA3A0PJX4 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
SHISA3A0PJX4 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHISA3A0PJX4 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHISA3A0PJX4 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHISA3A0PJX4 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.26□□□□□ -1.57
SHISA3A0PJX4 MIR133A2-201ENST00000347538 102 ntBASIC5.26□□□□□ -1.57
SHISA3A0PJX4 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHISA3A0PJX4 RNA5SP308-201ENST00000362532 115 ntBASIC5.26□□□□□ -1.57
SHISA3A0PJX4 Y_RNA.100-201ENST00000363141 102 ntBASIC5.26□□□□□ -1.57
SHISA3A0PJX4 SNORA4.3-201ENST00000365564 137 ntBASIC5.26□□□□□ -1.57
SHISA3A0PJX4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SHISA3A0PJX4 RNU6-193P-201ENST00000410977 107 ntBASIC5.26□□□□□ -1.57
SHISA3A0PJX4 VN1R36P-201ENST00000414936 291 ntBASIC5.26□□□□□ -1.57
SHISA3A0PJX4 RPL26P29-201ENST00000415623 438 ntBASIC5.26□□□□□ -1.57
SHISA3A0PJX4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.26□□□□□ -1.57
SHISA3A0PJX4 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.26□□□□□ -1.57
SHISA3A0PJX4 DUTP6-201ENST00000425573 462 ntBASIC5.26□□□□□ -1.57
SHISA3A0PJX4 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms