Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 OTUD4P1-201ENST00000237841 3067 ntBASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 RNU1-75P-201ENST00000347264 129 ntBASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 RNA5SP479-201ENST00000364858 117 ntBASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 RN7SKP53-201ENST00000411337 315 ntBASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 AC068533.1-201ENST00000418542 415 ntBASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 RPL17P36-201ENST00000420302 549 ntBASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 AC007064.3-201ENST00000422608 359 ntBASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 AP000907.1-201ENST00000428428 510 ntBASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 RPS3AP46-201ENST00000448352 682 ntBASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 EIF4A1P11-201ENST00000451239 222 ntBASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 AC243772.1-201ENST00000451620 410 ntBASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 AC007688.1-201ENST00000475592 759 ntBASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 PRELID3BP5-201ENST00000508612 460 ntBASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 MIR2276-201ENST00000516886 89 ntBASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 RN7SKP289-201ENST00000517244 295 ntBASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 AP000926.4-201ENST00000527351 454 ntBASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 AC106785.3-201ENST00000564064 847 ntBASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 AL451086.1-201ENST00000605596 223 ntBASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 AL391497.1-201ENST00000608671 547 ntBASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 U4.6-201ENST00000621618 127 ntBASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RNF11Q9Y3C5 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 AC090337.1-201ENST00000579651 2074 ntBASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 FRG1CP-201ENST00000358464 769 ntBASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 AC093719.1-202ENST00000392735 373 ntBASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 MTCO3P31-201ENST00000405526 789 ntBASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 AL035423.1-201ENST00000420331 213 ntBASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 GLRXP1-201ENST00000423261 334 ntBASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 RWDD4P2-201ENST00000426392 563 ntBASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 HMGB3P5-201ENST00000428894 612 ntBASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 RPS20P1-201ENST00000434853 354 ntBASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 RN7SL594P-201ENST00000470590 287 ntBASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 AL049830.2-201ENST00000480072 201 ntBASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 RWDD4P1-201ENST00000488019 565 ntBASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 AC068446.3-201ENST00000555285 382 ntBASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 AC018816.2-201ENST00000621460 353 ntBASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 AP003355.3-201ENST00000623465 114 ntBASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RNF11Q9Y3C5 AC004972.1-201ENST00000623934 2209 ntBASIC3.4□□□□□ -1.86
RNF11Q9Y3C5 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.4□□□□□ -1.86
RNF11Q9Y3C5 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
RNF11Q9Y3C5 Z73965.1-201ENST00000623412 2297 ntBASIC3.4□□□□□ -1.86
RNF11Q9Y3C5 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
RNF11Q9Y3C5 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.4□□□□□ -1.86
RNF11Q9Y3C5 SKINT1L-201ENST00000401057 817 ntBASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 HMGB3P18-201ENST00000406327 590 ntBASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 ATP5A1P2-201ENST00000412323 255 ntBASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 AC099336.2-201ENST00000422457 254 ntBASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 AL158073.1-201ENST00000426848 1104 ntBASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 NOTCH2P1-201ENST00000443481 624 ntBASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 RPS27P29-201ENST00000463110 252 ntBASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 RPL23AP44-201ENST00000482216 473 ntBASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 SETP14-201ENST00000497538 873 ntBASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 HMGN1P11-201ENST00000508668 303 ntBASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 AL121839.1-201ENST00000556233 1185 ntBASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 AC005229.3-201ENST00000603438 323 ntBASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF11Q9Y3C5 AC010809.3-201ENST00000621310 641 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms