Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 OR4A15-201ENST00000314706 1035 ntBASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 Y_RNA.97-201ENST00000363094 102 ntBASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 DPH3P2-201ENST00000422618 250 ntBASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 AC092013.1-201ENST00000438795 332 ntBASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 RPS27AP17-201ENST00000463344 455 ntBASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 COX6B1P2-201ENST00000489624 230 ntBASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 MIR4776-2-201ENST00000580204 80 ntBASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 AC211433.2-201ENST00000608433 387 ntBASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 AC005899.7-201ENST00000618199 588 ntBASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 AL691477.1-201ENST00000624398 162 ntBASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 MIR193BHG-214ENST00000641765 509 ntBASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 AC011755.1-201ENST00000623763 2049 ntBASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 RNU6-238P-201ENST00000363313 106 ntBASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 RNU6-187P-201ENST00000384139 106 ntBASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 Y_RNA.527-201ENST00000384573 102 ntBASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 MRPL42P3-201ENST00000401492 326 ntBASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 OR6E1P-201ENST00000414424 923 ntBASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 AC073072.2-201ENST00000447425 348 ntBASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 AC073055.1-201ENST00000456901 1621 ntBASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 AC068587.1-201ENST00000483613 781 ntBASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 AC110794.1-201ENST00000505816 425 ntBASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 AC108064.1-201ENST00000513791 460 ntBASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 SNORA70.20-201ENST00000516848 126 ntBASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 SNX18P3-202ENST00000565670 1750 ntBASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 AC083806.3-201ENST00000614016 455 ntBASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 PISRT1-201ENST00000626175 531 ntBASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC7.65□□□□□ -1.18
PDZRN3Q9UPQ7 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.65□□□□□ -1.19
PDZRN3Q9UPQ7 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
PDZRN3Q9UPQ7 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.65□□□□□ -1.19
PDZRN3Q9UPQ7 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
PDZRN3Q9UPQ7 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
PDZRN3Q9UPQ7 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
PDZRN3Q9UPQ7 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
PDZRN3Q9UPQ7 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 MTND5P28-201ENST00000438005 1594 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 Y_RNA.159-201ENST00000363674 87 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 RNY4P34-201ENST00000364779 95 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 Y_RNA.381-201ENST00000365666 102 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 Y_RNA.555-201ENST00000384673 110 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 AC025750.1-201ENST00000399891 379 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 MIR937-201ENST00000401271 86 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms