Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 ATP5J2P6-201ENST00000565203 266 ntBASIC4.77□□□□□ -1.65
VPS4AQ9UN37 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS4AQ9UN37 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.77□□□□□ -1.65
VPS4AQ9UN37 AC097505.1-201ENST00000610199 565 ntBASIC4.77□□□□□ -1.65
VPS4AQ9UN37 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS4AQ9UN37 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS4AQ9UN37 AC124312.6-202ENST00000623624 418 ntBASIC4.77□□□□□ -1.65
VPS4AQ9UN37 AC091965.5-201ENST00000624785 342 ntBASIC4.77□□□□□ -1.65
VPS4AQ9UN37 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
VPS4AQ9UN37 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS4AQ9UN37 AL445437.1-201ENST00000623157 3087 ntBASIC4.77□□□□□ -1.65
VPS4AQ9UN37 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS4AQ9UN37 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS4AQ9UN37 OR14L1P-202ENST00000641545 3009 ntBASIC4.77□□□□□ -1.65
VPS4AQ9UN37 MAPK10-286ENST00000641208 8747 ntBASIC4.77□□□□□ -1.65
VPS4AQ9UN37 AL445523.1-201ENST00000451184 1362 ntBASIC4.77□□□□□ -1.65
VPS4AQ9UN37 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 SNORA70.2-201ENST00000364506 135 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 SUGT1P1-201ENST00000379514 476 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 SNORD116-23-201ENST00000384645 92 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 RNU6-1151P-201ENST00000384684 107 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 RNU6-1300P-201ENST00000391046 108 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 Z97832.1-201ENST00000402490 328 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 CYCSP10-201ENST00000417973 294 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 MTCO3P5-201ENST00000433620 714 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 ACTR3P2-201ENST00000439585 1257 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 RPL21P71-201ENST00000465598 459 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 RPS23P7-201ENST00000466210 444 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC104689.1-201ENST00000473356 768 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 RPL23AP72-201ENST00000492447 435 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 IRF5P1-201ENST00000504852 2164 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 RNA5SP249-201ENST00000516127 99 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC090819.1-201ENST00000523800 1111 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC021006.3-201ENST00000530771 192 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AP006289.1-201ENST00000538089 277 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC068714.1-201ENST00000559623 800 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC009117.1-201ENST00000563948 554 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC022069.1-201ENST00000582910 658 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC133552.5-201ENST00000604266 540 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC010738.1-201ENST00000604970 987 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC004223.4-201ENST00000612426 332 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
VPS4AQ9UN37 SMG1P6-201ENST00000532337 2930 ntBASIC4.76□□□□□ -1.65
VPS4AQ9UN37 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 Z99496.1-201ENST00000469424 1477 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AL450326.2-201ENST00000421913 1962 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 SNORA73.1-201ENST00000363107 205 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 RNU6-1200P-201ENST00000384162 107 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms