Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 ACTG1P13-201ENST00000486987 1043 ntBASIC3.71□□□□□ -1.82
CISHQ9NSE2 AP002812.1-201ENST00000495378 474 ntBASIC3.71□□□□□ -1.82
CISHQ9NSE2 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.71□□□□□ -1.82
CISHQ9NSE2 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.71□□□□□ -1.82
CISHQ9NSE2 OR8I1P-201ENST00000529291 931 ntBASIC3.71□□□□□ -1.82
CISHQ9NSE2 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.71□□□□□ -1.82
CISHQ9NSE2 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.71□□□□□ -1.82
CISHQ9NSE2 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
CISHQ9NSE2 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.71□□□□□ -1.82
CISHQ9NSE2 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.71□□□□□ -1.82
CISHQ9NSE2 AL357559.1-201ENST00000622228 274 ntBASIC3.71□□□□□ -1.82
CISHQ9NSE2 AC067931.1-201ENST00000624190 671 ntBASIC3.71□□□□□ -1.82
CISHQ9NSE2 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CISHQ9NSE2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.71□□□□□ -1.82
CISHQ9NSE2 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CISHQ9NSE2 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CISHQ9NSE2 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CISHQ9NSE2 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CISHQ9NSE2 RNU6-1279P-201ENST00000383917 103 ntBASIC3.7□□□□□ -1.82
CISHQ9NSE2 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CISHQ9NSE2 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.7□□□□□ -1.82
CISHQ9NSE2 RPL23AP48-201ENST00000406913 488 ntBASIC3.7□□□□□ -1.82
CISHQ9NSE2 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.7□□□□□ -1.82
CISHQ9NSE2 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.7□□□□□ -1.82
CISHQ9NSE2 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.7□□□□□ -1.82
CISHQ9NSE2 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.7□□□□□ -1.82
CISHQ9NSE2 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.7□□□□□ -1.82
CISHQ9NSE2 IFNWP4-201ENST00000453148 294 ntBASIC3.7□□□□□ -1.82
CISHQ9NSE2 AL121877.1-201ENST00000453704 622 ntBASIC3.7□□□□□ -1.82
CISHQ9NSE2 AP000563.1-201ENST00000490865 758 ntBASIC3.7□□□□□ -1.82
CISHQ9NSE2 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CISHQ9NSE2 AC006499.5-201ENST00000505037 514 ntBASIC3.7□□□□□ -1.82
CISHQ9NSE2 AC110768.1-201ENST00000509222 400 ntBASIC3.7□□□□□ -1.82
CISHQ9NSE2 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.7□□□□□ -1.82
CISHQ9NSE2 AC015911.5-201ENST00000587076 451 ntBASIC3.7□□□□□ -1.82
CISHQ9NSE2 AC067852.3-201ENST00000589177 561 ntBASIC3.7□□□□□ -1.82
CISHQ9NSE2 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CISHQ9NSE2 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.7□□□□□ -1.82
CISHQ9NSE2 AC015849.6-201ENST00000605454 474 ntBASIC3.7□□□□□ -1.82
CISHQ9NSE2 AC007390.2-201ENST00000606229 3803 ntBASIC3.7□□□□□ -1.82
CISHQ9NSE2 AP006248.2-201ENST00000623309 592 ntBASIC3.7□□□□□ -1.82
CISHQ9NSE2 AL356121.2-201ENST00000624715 780 ntBASIC3.7□□□□□ -1.82
CISHQ9NSE2 AL392088.2-201ENST00000637607 285 ntBASIC3.7□□□□□ -1.82
CISHQ9NSE2 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CISHQ9NSE2 AL645937.1-201ENST00000641739 1652 ntBASIC3.7□□□□□ -1.82
CISHQ9NSE2 PHKBP1-201ENST00000450951 1951 ntBASIC3.7□□□□□ -1.82
CISHQ9NSE2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CISHQ9NSE2 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CISHQ9NSE2 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CISHQ9NSE2 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CISHQ9NSE2 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CISHQ9NSE2 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CISHQ9NSE2 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CISHQ9NSE2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CISHQ9NSE2 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CISHQ9NSE2 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CISHQ9NSE2 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CISHQ9NSE2 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.69□□□□□ -1.82
CISHQ9NSE2 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CISHQ9NSE2 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CISHQ9NSE2 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CISHQ9NSE2 RNU4-35P-201ENST00000362588 141 ntBASIC3.69□□□□□ -1.82
CISHQ9NSE2 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
CISHQ9NSE2 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CISHQ9NSE2 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CISHQ9NSE2 SNORD17-201ENST00000390930 237 ntBASIC3.69□□□□□ -1.82
CISHQ9NSE2 HMGB3P18-201ENST00000406327 590 ntBASIC3.69□□□□□ -1.82
CISHQ9NSE2 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.69□□□□□ -1.82
CISHQ9NSE2 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.69□□□□□ -1.82
CISHQ9NSE2 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.69□□□□□ -1.82
CISHQ9NSE2 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.69□□□□□ -1.82
CISHQ9NSE2 AL158071.1-201ENST00000430315 461 ntBASIC3.69□□□□□ -1.82
CISHQ9NSE2 RPL37P1-201ENST00000432310 284 ntBASIC3.69□□□□□ -1.82
CISHQ9NSE2 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.69□□□□□ -1.82
CISHQ9NSE2 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.69□□□□□ -1.82
CISHQ9NSE2 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.69□□□□□ -1.82
CISHQ9NSE2 PRELID3BP7-201ENST00000503606 469 ntBASIC3.69□□□□□ -1.82
CISHQ9NSE2 RN7SKP157-201ENST00000516174 282 ntBASIC3.69□□□□□ -1.82
CISHQ9NSE2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.69□□□□□ -1.82
CISHQ9NSE2 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CISHQ9NSE2 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.69□□□□□ -1.82
CISHQ9NSE2 U3.45-201ENST00000607547 219 ntBASIC3.69□□□□□ -1.82
CISHQ9NSE2 AC017076.1-201ENST00000607613 578 ntBASIC3.69□□□□□ -1.82
CISHQ9NSE2 MIR6715B-201ENST00000637172 77 ntBASIC3.69□□□□□ -1.82
CISHQ9NSE2 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CISHQ9NSE2 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
CISHQ9NSE2 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CISHQ9NSE2 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CISHQ9NSE2 AC032011.1-201ENST00000611703 1549 ntBASIC3.69□□□□□ -1.82
CISHQ9NSE2 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.69□□□□□ -1.82
CISHQ9NSE2 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.68□□□□□ -1.82
CISHQ9NSE2 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CISHQ9NSE2 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CISHQ9NSE2 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.68□□□□□ -1.82
CISHQ9NSE2 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CISHQ9NSE2 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CISHQ9NSE2 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CISHQ9NSE2 RSL24D1P1-201ENST00000404972 493 ntBASIC3.68□□□□□ -1.82
CISHQ9NSE2 AL136131.1-201ENST00000406079 803 ntBASIC3.68□□□□□ -1.82
CISHQ9NSE2 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms