Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 CASC19-206ENST00000641028 1430 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 RNA5SP191-201ENST00000362585 102 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 RNU4-44P-201ENST00000363050 141 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 RAP1BP1-201ENST00000412709 553 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 AC092162.1-201ENST00000432828 434 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 RPS26P56-201ENST00000444468 240 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 RPL36AP15-201ENST00000444514 266 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 AC239367.2-201ENST00000447309 705 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 RHEBP2-201ENST00000450289 600 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 AL133217.1-201ENST00000450980 425 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 MRPL42P4-201ENST00000453267 443 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 AP000942.1-201ENST00000463969 747 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 NDUFB4P12-201ENST00000513465 390 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 RN7SKP122-201ENST00000515923 296 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 RNU6-1129P-201ENST00000515964 104 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 SOD1P3-201ENST00000518682 454 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 AL356057.1-201ENST00000533798 831 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 AC090515.3-201ENST00000560431 315 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 AC087465.1-201ENST00000560574 245 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 MIR4277-201ENST00000578298 84 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 AC011477.5-201ENST00000586571 259 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 AC010620.1-201ENST00000601088 1102 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 AC019206.1-201ENST00000621938 425 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 OR8B1P-202ENST00000641132 1178 ntBASIC5.01□□□□□ -1.61
VPS45Q9NRW7 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VPS45Q9NRW7 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS45Q9NRW7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
VPS45Q9NRW7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5□□□□□ -1.61
VPS45Q9NRW7 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
VPS45Q9NRW7 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5□□□□□ -1.61
VPS45Q9NRW7 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
VPS45Q9NRW7 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
VPS45Q9NRW7 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5□□□□□ -1.61
VPS45Q9NRW7 OR1L1-202ENST00000373686 1083 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 Y_RNA.465-201ENST00000384293 102 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 MIR23A-201ENST00000385245 73 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5□□□□□ -1.61
VPS45Q9NRW7 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5□□□□□ -1.61
VPS45Q9NRW7 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5□□□□□ -1.61
VPS45Q9NRW7 AC073136.2-201ENST00000417282 849 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5□□□□□ -1.61
VPS45Q9NRW7 AC004074.1-201ENST00000421810 1063 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 CENPIP1-201ENST00000425713 902 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5□□□□□ -1.61
VPS45Q9NRW7 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5□□□□□ -1.61
VPS45Q9NRW7 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5□□□□□ -1.61
VPS45Q9NRW7 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5□□□□□ -1.61
VPS45Q9NRW7 AC004865.1-201ENST00000442276 1003 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5□□□□□ -1.61
VPS45Q9NRW7 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5□□□□□ -1.61
VPS45Q9NRW7 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5□□□□□ -1.61
VPS45Q9NRW7 AC011979.1-201ENST00000472300 483 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 AC022795.1-201ENST00000473808 480 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 AP000893.1-201ENST00000474462 794 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5□□□□□ -1.61
VPS45Q9NRW7 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5□□□□□ -1.61
VPS45Q9NRW7 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5□□□□□ -1.61
VPS45Q9NRW7 RNA5SP135-201ENST00000517019 125 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 OR5M2P-201ENST00000529003 936 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5□□□□□ -1.61
VPS45Q9NRW7 AC010198.2-201ENST00000550612 259 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5□□□□□ -1.61
VPS45Q9NRW7 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5□□□□□ -1.61
VPS45Q9NRW7 MIR3912-201ENST00000577566 105 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5□□□□□ -1.61
VPS45Q9NRW7 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 VIS1.1-201ENST00000610517 203 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 AL450489.1-201ENST00000612071 468 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 AC107075.1-201ENST00000613695 314 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms