Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AC069366.1-201ENST00000583159 838 ntBASIC3.66□□□□□ -1.82
CCNB1IP1Q9NPC3 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.66□□□□□ -1.82
CCNB1IP1Q9NPC3 AC007687.1-201ENST00000602704 304 ntBASIC3.66□□□□□ -1.82
CCNB1IP1Q9NPC3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CCNB1IP1Q9NPC3 MIR6864-201ENST00000617935 70 ntBASIC3.66□□□□□ -1.82
CCNB1IP1Q9NPC3 MIR3653-201ENST00000625572 110 ntBASIC3.66□□□□□ -1.82
CCNB1IP1Q9NPC3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.66□□□□□ -1.82
CCNB1IP1Q9NPC3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
CCNB1IP1Q9NPC3 AL021368.2-201ENST00000606125 5352 ntBASIC3.66□□□□□ -1.82
CCNB1IP1Q9NPC3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCNB1IP1Q9NPC3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
CCNB1IP1Q9NPC3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 SNORD35B-201ENST00000363660 87 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 SNORD6-201ENST00000365444 73 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 TCEA1P4-201ENST00000415066 844 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AC108032.1-201ENST00000416706 207 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 RPL21P109-201ENST00000422213 475 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 RFESDP1-201ENST00000422350 461 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AC098824.1-201ENST00000453565 980 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 CEACAMP4-201ENST00000457676 421 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 NDUFA5P9-201ENST00000472609 340 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 TMED11P-201ENST00000479478 690 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 MTCO1P31-201ENST00000506355 492 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 USP9YP5-201ENST00000511770 630 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AC099522.1-202ENST00000514718 367 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 MTCO1P30-201ENST00000515244 580 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 RN7SKP83-201ENST00000516512 178 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 HAUS1P3-201ENST00000523909 662 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AC006270.2-201ENST00000578523 652 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AC023575.1-201ENST00000580510 358 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 CBX3P2-202ENST00000583365 535 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AC114878.2-201ENST00000604863 1251 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 CR589904.2-201ENST00000612533 440 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 RNVU1-4-201ENST00000612985 164 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AC124312.6-202ENST00000623624 418 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 ATE1-AS1-202ENST00000636460 506 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 AC006504.1-201ENST00000562493 3666 ntBASIC3.65□□□□□ -1.83
CCNB1IP1Q9NPC3 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 METTL21EP-201ENST00000298105 713 ntBASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 SNORA70E-201ENST00000384492 135 ntBASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 OR6C69P-201ENST00000394268 893 ntBASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 AL161909.1-201ENST00000397390 712 ntBASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 MTATP6P31-201ENST00000406985 692 ntBASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 AL807761.1-201ENST00000417622 171 ntBASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 LINC01347-201ENST00000417964 355 ntBASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 OR5AW1P-201ENST00000426334 1006 ntBASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 BTF3P10-201ENST00000433415 495 ntBASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 RPL7P29-201ENST00000437151 728 ntBASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 AL138799.3-201ENST00000438968 350 ntBASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 HMGB1P37-201ENST00000439613 609 ntBASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 AC041039.1-201ENST00000485656 536 ntBASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 RPL7P24-201ENST00000493052 752 ntBASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 RPL5P23-201ENST00000496040 868 ntBASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 TRAV31-201ENST00000502780 342 ntBASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 AC138701.1-201ENST00000524329 714 ntBASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 NOP56P3-201ENST00000549457 385 ntBASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 AL161729.3-201ENST00000603533 673 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms