Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 OR4F13P-202ENST00000560066 2054 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSU72Q9NP77 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 RBPJP7-201ENST00000442803 1447 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 RBPJP5-201ENST00000449433 1447 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SSU72Q9NP77 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC092681.1-201ENST00000297369 291 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSU72Q9NP77 RNA5SP77-201ENST00000365394 120 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 RNU6-730P-201ENST00000383954 104 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 MIR606-201ENST00000384851 96 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 AL354719.1-201ENST00000406535 843 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 MIR1266-201ENST00000408125 84 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 RN7SKP240-201ENST00000410583 375 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 RNU6-373P-201ENST00000411247 98 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 SLC35E1P1-201ENST00000419313 864 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 RPL35AP12-201ENST00000425362 338 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 HMGN2P27-201ENST00000427352 270 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC023141.8-201ENST00000442554 208 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 RPL7P12-201ENST00000446719 750 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 AL445991.1-201ENST00000450381 475 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 AL121877.1-201ENST00000453704 622 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC099670.1-201ENST00000455141 783 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 RNU6-261P-201ENST00000459506 102 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 PCBP2P3-201ENST00000509726 843 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC123904.2-201ENST00000548059 300 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 HSPE1P3-201ENST00000559254 309 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 MIR3118-1-201ENST00000581787 76 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 MIR4732-201ENST00000581873 76 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC007687.1-201ENST00000602704 304 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC115621.1-201ENST00000604653 858 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC021646.1-201ENST00000605469 484 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC023206.1-201ENST00000605824 298 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 AL391813.2-201ENST00000609113 322 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 AL139099.4-201ENST00000614802 114 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC009248.2-201ENST00000619826 254 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC009161.2-201ENST00000624626 138 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSU72Q9NP77 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSU72Q9NP77 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSU72Q9NP77 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SSU72Q9NP77 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSU72Q9NP77 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SSU72Q9NP77 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSU72Q9NP77 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSU72Q9NP77 AP004607.3-201ENST00000530354 3915 ntBASIC5.76□□□□□ -1.49
SSU72Q9NP77 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSU72Q9NP77 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SSU72Q9NP77 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SSU72Q9NP77 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSU72Q9NP77 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSU72Q9NP77 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSU72Q9NP77 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSU72Q9NP77 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSU72Q9NP77 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSU72Q9NP77 AL121886.1-201ENST00000358609 435 ntBASIC5.75□□□□□ -1.49
SSU72Q9NP77 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSU72Q9NP77 RNU6-456P-201ENST00000384493 107 ntBASIC5.75□□□□□ -1.49
SSU72Q9NP77 MIR138-2-201ENST00000384916 84 ntBASIC5.75□□□□□ -1.49
SSU72Q9NP77 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 BTBD10P2-201ENST00000404779 676 ntBASIC5.75□□□□□ -1.49
SSU72Q9NP77 SNRPEP6-201ENST00000407465 277 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms