Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC092393.1-201ENST00000439625 742 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 MTND4P25-201ENST00000441039 533 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 MTND4P18-201ENST00000447010 465 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 SCARNA10-201ENST00000459255 330 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC005410.1-202ENST00000460347 485 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 RPS20P4-201ENST00000461659 355 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 RPS4XP6-201ENST00000477670 797 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 RPS4XP18-201ENST00000495480 763 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC025164.1-201ENST00000496249 478 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC080014.1-201ENST00000496877 1201 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 MTND5P13-201ENST00000513046 1079 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 FABP5P12-201ENST00000515543 389 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 RNA5SP360-201ENST00000516555 118 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 RPL12P22-201ENST00000519073 490 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC007115.1-201ENST00000546853 234 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC087897.1-201ENST00000550134 156 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC087477.6-201ENST00000559595 843 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 MIR4801-201ENST00000582704 82 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC103792.1-201ENST00000603591 919 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC090948.1-201ENST00000607464 549 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC092653.1-201ENST00000608509 531 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC073534.2-201ENST00000620377 381 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AL157770.1-201ENST00000623049 439 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC092192.1-201ENST00000633154 1018 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 MIR1322-201ENST00000638013 71 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 BTBD10P1-201ENST00000549824 1352 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC092435.4-201ENST00000623012 4159 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 RNA5SP28-201ENST00000363841 119 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AL021407.1-201ENST00000404531 386 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AL136310.1-201ENST00000404926 654 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 MIR1193-201ENST00000408109 78 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AC009237.10-201ENST00000414112 510 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 RAD23BP2-201ENST00000416003 1207 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AL356320.2-201ENST00000417263 507 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 MTND4P3-201ENST00000417829 541 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 ELOCP9-201ENST00000418624 239 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AC023128.2-201ENST00000420880 1223 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AL035458.1-201ENST00000433096 585 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 NANOGP2-201ENST00000435391 727 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 PTGES3P1-201ENST00000439531 483 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 RPL23AP93-201ENST00000440847 484 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 TAF9P1-201ENST00000445421 515 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 BMI1P1-201ENST00000445879 941 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AL360221.1-201ENST00000445989 335 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AL589765.3-201ENST00000446084 462 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 TAF9P2-201ENST00000454958 515 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AC092754.2-201ENST00000463506 460 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AC107398.1-201ENST00000486904 505 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 RPF2P2-201ENST00000504693 896 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 RN7SKP21-201ENST00000516503 220 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 NDUFS5P6-201ENST00000529136 295 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AC022882.1-201ENST00000532142 501 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AC011611.5-201ENST00000552477 578 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AL049870.4-201ENST00000555741 486 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 RPL21P7-201ENST00000557463 483 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 MTATP6P3-201ENST00000581686 676 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AP000811.1-201ENST00000603803 651 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms