Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.03□□□□□ -1.76
NXF3Q9H4D5 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
NXF3Q9H4D5 MIR208A-201ENST00000362287 71 ntBASIC4.03□□□□□ -1.76
NXF3Q9H4D5 ATP5F1P4-201ENST00000397288 746 ntBASIC4.03□□□□□ -1.76
NXF3Q9H4D5 RNA5SP44-201ENST00000410446 133 ntBASIC4.03□□□□□ -1.76
NXF3Q9H4D5 RNU6-564P-201ENST00000410983 104 ntBASIC4.03□□□□□ -1.76
NXF3Q9H4D5 RNA5SP39-201ENST00000411245 120 ntBASIC4.03□□□□□ -1.76
NXF3Q9H4D5 RPS29P4-201ENST00000414733 161 ntBASIC4.03□□□□□ -1.76
NXF3Q9H4D5 AC068533.1-201ENST00000418542 415 ntBASIC4.03□□□□□ -1.76
NXF3Q9H4D5 BTF3P9-201ENST00000418784 283 ntBASIC4.03□□□□□ -1.76
NXF3Q9H4D5 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.03□□□□□ -1.76
NXF3Q9H4D5 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.03□□□□□ -1.76
NXF3Q9H4D5 MTCO1P45-201ENST00000431457 267 ntBASIC4.03□□□□□ -1.76
NXF3Q9H4D5 RPS6P12-201ENST00000432491 726 ntBASIC4.03□□□□□ -1.76
NXF3Q9H4D5 HSPD1P21-201ENST00000436541 245 ntBASIC4.03□□□□□ -1.76
NXF3Q9H4D5 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.03□□□□□ -1.76
NXF3Q9H4D5 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.03□□□□□ -1.76
NXF3Q9H4D5 RPS3AP46-201ENST00000448352 682 ntBASIC4.03□□□□□ -1.76
NXF3Q9H4D5 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.03□□□□□ -1.76
NXF3Q9H4D5 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.03□□□□□ -1.76
NXF3Q9H4D5 S100A11P1-201ENST00000477525 312 ntBASIC4.03□□□□□ -1.76
NXF3Q9H4D5 METTL15P1-201ENST00000481421 1045 ntBASIC4.03□□□□□ -1.76
NXF3Q9H4D5 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.03□□□□□ -1.76
NXF3Q9H4D5 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.03□□□□□ -1.76
NXF3Q9H4D5 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.03□□□□□ -1.76
NXF3Q9H4D5 RN7SKP18-201ENST00000516005 275 ntBASIC4.03□□□□□ -1.76
NXF3Q9H4D5 SOD1P3-201ENST00000518682 454 ntBASIC4.03□□□□□ -1.76
NXF3Q9H4D5 SMARCE1P4-201ENST00000523647 241 ntBASIC4.03□□□□□ -1.76
NXF3Q9H4D5 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.03□□□□□ -1.76
NXF3Q9H4D5 AC069200.1-201ENST00000609511 323 ntBASIC4.03□□□□□ -1.76
NXF3Q9H4D5 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.03□□□□□ -1.76
NXF3Q9H4D5 RMST_9.1-201ENST00000619945 193 ntBASIC4.03□□□□□ -1.76
NXF3Q9H4D5 MIR4727-201ENST00000622232 55 ntBASIC4.03□□□□□ -1.76
NXF3Q9H4D5 AC000123.2-201ENST00000623124 461 ntBASIC4.03□□□□□ -1.76
NXF3Q9H4D5 AC104820.1-201ENST00000624183 307 ntBASIC4.03□□□□□ -1.76
NXF3Q9H4D5 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.03□□□□□ -1.76
NXF3Q9H4D5 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
NXF3Q9H4D5 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NXF3Q9H4D5 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NXF3Q9H4D5 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
NXF3Q9H4D5 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
NXF3Q9H4D5 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.02□□□□□ -1.77
NXF3Q9H4D5 RNA5SP424-201ENST00000390988 115 ntBASIC4.02□□□□□ -1.77
NXF3Q9H4D5 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 CACYBPP1-201ENST00000438592 684 ntBASIC4.02□□□□□ -1.77
NXF3Q9H4D5 MTND6P6-201ENST00000478031 263 ntBASIC4.02□□□□□ -1.77
NXF3Q9H4D5 AC106707.2-201ENST00000484182 374 ntBASIC4.02□□□□□ -1.77
NXF3Q9H4D5 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.02□□□□□ -1.77
NXF3Q9H4D5 OR8I1P-201ENST00000529291 931 ntBASIC4.02□□□□□ -1.77
NXF3Q9H4D5 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 AC008011.1-201ENST00000545989 227 ntBASIC4.02□□□□□ -1.77
NXF3Q9H4D5 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.02□□□□□ -1.77
NXF3Q9H4D5 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 AL390816.3-201ENST00000604527 1066 ntBASIC4.02□□□□□ -1.77
NXF3Q9H4D5 BX322635.1-201ENST00000605804 496 ntBASIC4.02□□□□□ -1.77
NXF3Q9H4D5 AC012467.1-201ENST00000607740 256 ntBASIC4.02□□□□□ -1.77
NXF3Q9H4D5 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 AL391261.4-201ENST00000616012 481 ntBASIC4.02□□□□□ -1.77
NXF3Q9H4D5 AC012314.7-201ENST00000619693 93 ntBASIC4.02□□□□□ -1.77
NXF3Q9H4D5 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
NXF3Q9H4D5 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
NXF3Q9H4D5 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NXF3Q9H4D5 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
NXF3Q9H4D5 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NXF3Q9H4D5 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NXF3Q9H4D5 AC134882.1-201ENST00000603738 1676 ntBASIC4.01□□□□□ -1.77
NXF3Q9H4D5 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.01□□□□□ -1.77
NXF3Q9H4D5 SNORA63.1-201ENST00000362493 131 ntBASIC4.01□□□□□ -1.77
NXF3Q9H4D5 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
NXF3Q9H4D5 AL603766.1-201ENST00000407763 664 ntBASIC4.01□□□□□ -1.77
NXF3Q9H4D5 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.01□□□□□ -1.77
NXF3Q9H4D5 TRGV6-201ENST00000417928 299 ntBASIC4.01□□□□□ -1.77
NXF3Q9H4D5 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.01□□□□□ -1.77
NXF3Q9H4D5 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.01□□□□□ -1.77
NXF3Q9H4D5 YWHAEP5-201ENST00000431545 765 ntBASIC4.01□□□□□ -1.77
NXF3Q9H4D5 CYCSP43-201ENST00000438233 310 ntBASIC4.01□□□□□ -1.77
NXF3Q9H4D5 PDSS1P2-201ENST00000449397 678 ntBASIC4.01□□□□□ -1.77
NXF3Q9H4D5 RPL7P31-201ENST00000450192 724 ntBASIC4.01□□□□□ -1.77
NXF3Q9H4D5 RPS26P15-201ENST00000488067 348 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms