Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM4Q9C037 MIR34B-201ENST00000385076 84 ntBASIC3.93□□□□□ -1.78
TRIM4Q9C037 RNU11-4P-201ENST00000391149 133 ntBASIC3.93□□□□□ -1.78
TRIM4Q9C037 EI24P2-201ENST00000397776 1076 ntBASIC3.93□□□□□ -1.78
TRIM4Q9C037 MIR1179-201ENST00000408703 91 ntBASIC3.93□□□□□ -1.78
TRIM4Q9C037 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM4Q9C037 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.93□□□□□ -1.78
TRIM4Q9C037 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM4Q9C037 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM4Q9C037 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.93□□□□□ -1.78
TRIM4Q9C037 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM4Q9C037 AC027807.1-201ENST00000559921 996 ntBASIC3.93□□□□□ -1.78
TRIM4Q9C037 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.93□□□□□ -1.78
TRIM4Q9C037 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM4Q9C037 AL133457.1-201ENST00000564251 987 ntBASIC3.93□□□□□ -1.78
TRIM4Q9C037 AC120057.2-201ENST00000571520 271 ntBASIC3.93□□□□□ -1.78
TRIM4Q9C037 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.93□□□□□ -1.78
TRIM4Q9C037 EIF1P6-201ENST00000600054 334 ntBASIC3.93□□□□□ -1.78
TRIM4Q9C037 MIR7702-201ENST00000621931 59 ntBASIC3.93□□□□□ -1.78
TRIM4Q9C037 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM4Q9C037 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM4Q9C037 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM4Q9C037 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM4Q9C037 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
TRIM4Q9C037 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM4Q9C037 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM4Q9C037 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM4Q9C037 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM4Q9C037 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM4Q9C037 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM4Q9C037 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM4Q9C037 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM4Q9C037 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM4Q9C037 MIR184-201ENST00000384962 84 ntBASIC3.92□□□□□ -1.78
TRIM4Q9C037 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM4Q9C037 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM4Q9C037 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM4Q9C037 AL356276.2-201ENST00000435919 558 ntBASIC3.92□□□□□ -1.78
TRIM4Q9C037 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM4Q9C037 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM4Q9C037 CFTRP1-201ENST00000456646 183 ntBASIC3.92□□□□□ -1.78
TRIM4Q9C037 AC078785.3-201ENST00000476607 425 ntBASIC3.92□□□□□ -1.78
TRIM4Q9C037 RPS29P19-201ENST00000479709 171 ntBASIC3.92□□□□□ -1.78
TRIM4Q9C037 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM4Q9C037 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.92□□□□□ -1.78
TRIM4Q9C037 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM4Q9C037 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM4Q9C037 SOD1P3-201ENST00000518682 454 ntBASIC3.92□□□□□ -1.78
TRIM4Q9C037 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.92□□□□□ -1.78
TRIM4Q9C037 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM4Q9C037 U6.98-201ENST00000637157 84 ntBASIC3.92□□□□□ -1.78
TRIM4Q9C037 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
TRIM4Q9C037 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM4Q9C037 ZNF542P-204ENST00000482727 1305 ntBASIC3.92□□□□□ -1.78
TRIM4Q9C037 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM4Q9C037 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
TRIM4Q9C037 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM4Q9C037 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM4Q9C037 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM4Q9C037 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM4Q9C037 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM4Q9C037 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
TRIM4Q9C037 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM4Q9C037 RN7SKP285-201ENST00000410137 318 ntBASIC3.91□□□□□ -1.78
TRIM4Q9C037 RNU4-6P-201ENST00000410804 122 ntBASIC3.91□□□□□ -1.78
TRIM4Q9C037 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM4Q9C037 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.91□□□□□ -1.78
TRIM4Q9C037 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM4Q9C037 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM4Q9C037 AL138787.1-202ENST00000437804 898 ntBASIC3.91□□□□□ -1.78
TRIM4Q9C037 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM4Q9C037 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM4Q9C037 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM4Q9C037 AC026784.1-201ENST00000507986 352 ntBASIC3.91□□□□□ -1.78
TRIM4Q9C037 KRT19P6-201ENST00000510983 209 ntBASIC3.91□□□□□ -1.78
TRIM4Q9C037 PAICSP4-201ENST00000517543 1253 ntBASIC3.91□□□□□ -1.78
TRIM4Q9C037 AC093331.1-201ENST00000521474 169 ntBASIC3.91□□□□□ -1.78
TRIM4Q9C037 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM4Q9C037 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.91□□□□□ -1.78
TRIM4Q9C037 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM4Q9C037 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM4Q9C037 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.91□□□□□ -1.78
TRIM4Q9C037 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM4Q9C037 MIR7151-201ENST00000617477 60 ntBASIC3.91□□□□□ -1.78
TRIM4Q9C037 AC010608.2-201ENST00000624830 470 ntBASIC3.91□□□□□ -1.78
TRIM4Q9C037 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM4Q9C037 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM4Q9C037 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM4Q9C037 AC000367.1-201ENST00000452711 1766 ntBASIC3.9□□□□□ -1.79
TRIM4Q9C037 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
TRIM4Q9C037 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
TRIM4Q9C037 ATP5F1P4-201ENST00000397288 746 ntBASIC3.9□□□□□ -1.79
TRIM4Q9C037 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM4Q9C037 VN1R31P-201ENST00000417498 730 ntBASIC3.9□□□□□ -1.79
TRIM4Q9C037 NOTCH2P1-201ENST00000443481 624 ntBASIC3.9□□□□□ -1.79
TRIM4Q9C037 AL035551.1-201ENST00000446931 348 ntBASIC3.9□□□□□ -1.79
TRIM4Q9C037 OR52Y1P-201ENST00000452418 828 ntBASIC3.9□□□□□ -1.79
TRIM4Q9C037 RNA5SP246-201ENST00000458909 119 ntBASIC3.9□□□□□ -1.79
TRIM4Q9C037 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM4Q9C037 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms