Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.42□□□□□ -1.7
UPF3BQ9BZI7 RPL21P71-201ENST00000465598 459 ntBASIC4.42□□□□□ -1.7
UPF3BQ9BZI7 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.42□□□□□ -1.7
UPF3BQ9BZI7 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.42□□□□□ -1.7
UPF3BQ9BZI7 AC026403.1-201ENST00000518938 295 ntBASIC4.42□□□□□ -1.7
UPF3BQ9BZI7 AC008489.1-201ENST00000524271 483 ntBASIC4.42□□□□□ -1.7
UPF3BQ9BZI7 OR7E13P-201ENST00000526052 910 ntBASIC4.42□□□□□ -1.7
UPF3BQ9BZI7 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UPF3BQ9BZI7 AC007424.1-203ENST00000554613 687 ntBASIC4.42□□□□□ -1.7
UPF3BQ9BZI7 AC087499.8-201ENST00000578406 226 ntBASIC4.42□□□□□ -1.7
UPF3BQ9BZI7 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.42□□□□□ -1.7
UPF3BQ9BZI7 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.42□□□□□ -1.7
UPF3BQ9BZI7 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.42□□□□□ -1.7
UPF3BQ9BZI7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
UPF3BQ9BZI7 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.42□□□□□ -1.7
UPF3BQ9BZI7 OR10AB1P-202ENST00000641219 1686 ntBASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 AC011155.1-201ENST00000316512 456 ntBASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 RNU6-283P-201ENST00000364788 107 ntBASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 RNU6-1279P-201ENST00000383917 103 ntBASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 MIR30B-201ENST00000384850 88 ntBASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 RNA5SP424-201ENST00000390988 115 ntBASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 RPL7P60-201ENST00000397636 735 ntBASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 AL391417.1-201ENST00000404100 426 ntBASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 HMGB3P20-201ENST00000417997 600 ntBASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 AL139247.1-201ENST00000422768 325 ntBASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 AC006960.3-201ENST00000561845 705 ntBASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 AC037471.2-201ENST00000564941 598 ntBASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 MIR4644-201ENST00000579929 84 ntBASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 AL161912.3-201ENST00000605404 628 ntBASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 AC016252.1-201ENST00000609721 474 ntBASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
UPF3BQ9BZI7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
UPF3BQ9BZI7 MTND5P1-201ENST00000445440 1375 ntBASIC4.4□□□□□ -1.7
UPF3BQ9BZI7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
UPF3BQ9BZI7 AL592437.2-201ENST00000421655 2434 ntBASIC4.4□□□□□ -1.7
UPF3BQ9BZI7 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 RNA5SP124-201ENST00000362739 110 ntBASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 ZNF602P-201ENST00000405929 924 ntBASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 RNA5SP239-201ENST00000410218 129 ntBASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 TCEA1P2-201ENST00000420496 906 ntBASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 MTND4LP13-201ENST00000425022 298 ntBASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 MTND2P2-201ENST00000434633 945 ntBASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 RPL12P46-201ENST00000436610 195 ntBASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 CLIC4P1-201ENST00000453177 535 ntBASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 MTCO3P16-201ENST00000454456 754 ntBASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 OR5AP1P-201ENST00000529730 940 ntBASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 FAM106CP-201ENST00000582212 507 ntBASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 MIR5195-201ENST00000583555 115 ntBASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 AC011471.1-201ENST00000585766 187 ntBASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 KLKP1-201ENST00000595979 403 ntBASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 uc_338.32-201ENST00000615087 172 ntBASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 AC015967.1-201ENST00000619893 476 ntBASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 AC024560.2-201ENST00000507981 1497 ntBASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 AC093908.1-201ENST00000623125 8092 ntBASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 AC007656.2-201ENST00000624902 4547 ntBASIC4.4□□□□□ -1.71
UPF3BQ9BZI7 AC110792.3-201ENST00000595906 1614 ntBASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 SAGE2P-201ENST00000420011 2126 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms