Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 RNU6-467P-201ENST00000517027 110 ntBASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 IGLVIV-53-201ENST00000520107 367 ntBASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 SNRPGP15-201ENST00000600149 222 ntBASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 RPL7P50-201ENST00000600588 727 ntBASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 AC113368.1-201ENST00000603736 382 ntBASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 AC023043.4-201ENST00000612081 449 ntBASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 AL356121.2-201ENST00000624715 780 ntBASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 USP8P1-201ENST00000494673 3183 ntBASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.76□□□□□ -1.49
CHMP4AQ9BY43 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 RNU6-619P-201ENST00000365146 108 ntBASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 RNU6-1226P-201ENST00000384317 107 ntBASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 MTCO3P31-201ENST00000405526 789 ntBASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 SNORA11F-201ENST00000408237 128 ntBASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 AC246680.2-201ENST00000422106 389 ntBASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 GTF2IP2-201ENST00000424290 697 ntBASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 AC114495.1-201ENST00000441274 436 ntBASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 AC044797.1-201ENST00000445744 679 ntBASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 NPM1P49-201ENST00000448027 714 ntBASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 RPL23AP24-201ENST00000458203 385 ntBASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 LSM6P2-201ENST00000552208 177 ntBASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 AC079587.1-201ENST00000603846 277 ntBASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 AC120053.1-201ENST00000607706 736 ntBASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 AC048347.1-201ENST00000624621 427 ntBASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHMP4AQ9BY43 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 AC139713.2-214ENST00000642059 1811 ntBASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 MIR141-201ENST00000384975 95 ntBASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 AC009220.1-201ENST00000451614 275 ntBASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 AL121877.1-201ENST00000453704 622 ntBASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 NAP1L1P3-201ENST00000462291 880 ntBASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 RPL7AP28-201ENST00000464513 571 ntBASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 AC108751.2-201ENST00000469993 231 ntBASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 NDUFA5P9-201ENST00000472609 340 ntBASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 AC107954.1-201ENST00000565906 727 ntBASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 CYP2C60P-201ENST00000566088 139 ntBASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 MIR4277-201ENST00000578298 84 ntBASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 AC018926.1-201ENST00000616335 435 ntBASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 AC078880.5-201ENST00000617845 421 ntBASIC5.74□□□□□ -1.49
CHMP4AQ9BY43 uc_338.13-201ENST00000618243 179 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms