Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 MTND5P1-201ENST00000445440 1375 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AC092070.2-203ENST00000598377 3644 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 Y_RNA.128-201ENST00000363391 112 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 Y_RNA.145-201ENST00000363527 102 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 RNA5SP500-201ENST00000364486 119 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 RN7SKP78-201ENST00000364711 318 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 RNU6-463P-201ENST00000384340 107 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 Y_RNA.474-201ENST00000384341 102 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 MTCO3P46-201ENST00000425787 232 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AC092651.1-201ENST00000426110 312 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 RPL7P4-203ENST00000430239 730 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 RPL12P16-201ENST00000431098 498 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 LSM1P1-201ENST00000438629 273 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AL935212.3-201ENST00000450729 284 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AC063943.1-201ENST00000465434 453 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AC103851.1-201ENST00000506833 274 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AC034159.1-201ENST00000513885 583 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 RN7SKP13-201ENST00000515933 244 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 RNU6-150P-201ENST00000516237 95 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 SNORA48.10-201ENST00000516965 160 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AC112191.2-201ENST00000522428 333 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 IGKV3D-34-201ENST00000522638 302 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AC090424.1-201ENST00000535243 736 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 SUB1P2-201ENST00000556401 297 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AC034105.3-201ENST00000565294 442 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AC093249.1-201ENST00000567049 203 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AC104785.1-201ENST00000603220 588 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AL133338.2-201ENST00000604292 736 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AC024940.5-201ENST00000622889 474 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AL078596.1-201ENST00000624856 447 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AL118496.1-201ENST00000440201 1812 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 AC066616.2-201ENST00000559334 1481 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 RLIMP2-201ENST00000427891 1563 ntBASIC4.87□□□□□ -1.63
SSBP3Q9BWW4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AC025574.1-201ENST00000554784 1653 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AC140134.1-201ENST00000511830 3544 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 Y_RNA.202-201ENST00000364083 110 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 SNORA4.3-201ENST00000365564 137 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 MIR559-201ENST00000385188 96 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AL356967.1-201ENST00000406305 431 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 RNU2-8P-201ENST00000410727 190 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 OR2AT2P-201ENST00000413438 905 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AL136133.1-201ENST00000413694 376 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 SNRPFP1-201ENST00000414761 252 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms