Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 AC009902.3-201ENST00000606235 2172 ntBASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 MTND5P33-201ENST00000571250 1450 ntBASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 AL139811.1-201ENST00000424779 2299 ntBASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 RNA5SP375-201ENST00000362975 119 ntBASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 AL121835.1-201ENST00000404250 354 ntBASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 RN7SKP293-201ENST00000411389 296 ntBASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 HMGN1P24-201ENST00000412282 298 ntBASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 AC245060.4-201ENST00000413293 1121 ntBASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 GNG5P5-201ENST00000420444 220 ntBASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 AC093155.2-201ENST00000420734 937 ntBASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 AL391219.1-201ENST00000422570 483 ntBASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 MRPS21P2-201ENST00000424704 264 ntBASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 EZH2P1-201ENST00000431167 291 ntBASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 AC009963.2-201ENST00000453431 138 ntBASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 HCG17-214ENST00000453558 732 ntTSL 5 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 RN7SL72P-201ENST00000460697 269 ntBASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 HMGB1P29-201ENST00000505659 499 ntBASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 MED28P5-201ENST00000528254 438 ntBASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 AL133241.1-201ENST00000556832 487 ntBASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 AC016180.1-201ENST00000567945 403 ntBASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 AC055876.5-201ENST00000605667 259 ntBASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 MIR6768-201ENST00000610734 72 ntBASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 MIR6886-201ENST00000619864 61 ntBASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 STK31-205ENST00000433467 3085 ntTSL 2 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.53□□□□□ -1.36
TRAIPQ9BWF2 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC6.52□□□□□ -1.36
TRAIPQ9BWF2 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.52□□□□□ -1.36
TRAIPQ9BWF2 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.52□□□□□ -1.37
TRAIPQ9BWF2 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRAIPQ9BWF2 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRAIPQ9BWF2 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRAIPQ9BWF2 ELF2P3-201ENST00000445099 1506 ntBASIC6.52□□□□□ -1.37
TRAIPQ9BWF2 MTCO1P9-201ENST00000505577 1534 ntBASIC6.52□□□□□ -1.37
TRAIPQ9BWF2 DNM1P47-203ENST00000571780 12667 ntBASIC6.52□□□□□ -1.37
TRAIPQ9BWF2 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
TRAIPQ9BWF2 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRAIPQ9BWF2 TMSB4XP4-201ENST00000323496 618 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms