Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 RAC1P3-201ENST00000416129 580 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 AC009362.1-201ENST00000427253 406 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 ANKRD54P1-201ENST00000433115 471 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 FABP5P2-201ENST00000439042 408 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 AC005094.1-201ENST00000440420 368 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 AL353803.3-201ENST00000444641 335 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
USB1Q9BQ65 AC087884.1-201ENST00000469738 328 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 RN7SL688P-201ENST00000471754 275 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 UBA52P7-201ENST00000486088 380 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 MTCO3P44-201ENST00000510977 541 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
USB1Q9BQ65 RNU6-570P-201ENST00000517051 105 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 OR7E161P-201ENST00000533722 967 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 AC068631.3-201ENST00000538831 225 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 AC061975.3-201ENST00000583209 244 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 AC023206.1-201ENST00000605824 298 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 AC004792.1-201ENST00000614523 137 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 AL118522.2-201ENST00000616045 615 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 FKBP1AP4-201ENST00000631775 336 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 AC233280.20-201ENST00000637412 416 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
USB1Q9BQ65 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
USB1Q9BQ65 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
USB1Q9BQ65 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
USB1Q9BQ65 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
USB1Q9BQ65 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
USB1Q9BQ65 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.49□□□□□ -1.37
USB1Q9BQ65 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USB1Q9BQ65 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USB1Q9BQ65 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.49□□□□□ -1.37
USB1Q9BQ65 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.49□□□□□ -1.37
USB1Q9BQ65 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USB1Q9BQ65 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
USB1Q9BQ65 AC005618.1-201ENST00000606901 3148 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USB1Q9BQ65 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USB1Q9BQ65 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USB1Q9BQ65 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USB1Q9BQ65 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USB1Q9BQ65 XIAPP3-201ENST00000312918 795 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USB1Q9BQ65 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USB1Q9BQ65 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC6.49□□□□□ -1.37
USB1Q9BQ65 Y_RNA.416-201ENST00000384014 113 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 RNU6-662P-201ENST00000384253 104 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 RNU6-434P-201ENST00000384376 107 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 SNORA68-201ENST00000384437 133 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 PPIAP9-201ENST00000403866 498 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 SNORA3.1-201ENST00000408166 111 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 RN7SKP30-201ENST00000411373 334 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USB1Q9BQ65 AL358176.3-201ENST00000420757 454 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC6.49□□□□□ -1.37
USB1Q9BQ65 RPL23AP38-201ENST00000423801 469 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC6.49□□□□□ -1.37
USB1Q9BQ65 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.49□□□□□ -1.37
USB1Q9BQ65 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.49□□□□□ -1.37
USB1Q9BQ65 AL359672.1-201ENST00000442302 409 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 RPS7P4-201ENST00000444127 582 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 NOP56P2-201ENST00000447491 769 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 AL353691.1-201ENST00000451332 387 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 AL133244.1-201ENST00000456007 258 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 AC009153.1-201ENST00000485799 496 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 RN7SL101P-201ENST00000496350 279 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 AC233724.10-201ENST00000510454 409 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC6.49□□□□□ -1.37
USB1Q9BQ65 RNU2-69P-201ENST00000516061 100 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.49□□□□□ -1.37
USB1Q9BQ65 WBP1LP3-201ENST00000523033 208 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.49□□□□□ -1.37
USB1Q9BQ65 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.49□□□□□ -1.37
USB1Q9BQ65 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.49□□□□□ -1.37
USB1Q9BQ65 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC6.49□□□□□ -1.37
USB1Q9BQ65 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.49□□□□□ -1.37
USB1Q9BQ65 AC068446.3-201ENST00000555285 382 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 AL049839.1-201ENST00000556151 657 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 AC027506.1-201ENST00000621395 198 ntBASIC6.49□□□□□ -1.37
USB1Q9BQ65 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USB1Q9BQ65 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.49□□□□□ -1.37
USB1Q9BQ65 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.49□□□□□ -1.37
USB1Q9BQ65 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
USB1Q9BQ65 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms