Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 MTND4P26-201ENST00000415971 1359 ntBASIC5.04□□□□□ -1.6
SMOQ99835 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.03□□□□□ -1.6
SMOQ99835 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SMOQ99835 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.03□□□□□ -1.6
SMOQ99835 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SMOQ99835 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
SMOQ99835 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SMOQ99835 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SMOQ99835 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SMOQ99835 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SMOQ99835 AC012618.3-205ENST00000637896 1496 ntBASIC5.03□□□□□ -1.6
SMOQ99835 AL590240.1-201ENST00000334118 313 ntBASIC5.03□□□□□ -1.6
SMOQ99835 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SMOQ99835 ATP5F1P4-201ENST00000397288 746 ntBASIC5.03□□□□□ -1.6
SMOQ99835 AL139098.1-201ENST00000407291 389 ntBASIC5.03□□□□□ -1.6
SMOQ99835 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.03□□□□□ -1.6
SMOQ99835 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SMOQ99835 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.03□□□□□ -1.6
SMOQ99835 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.03□□□□□ -1.6
SMOQ99835 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.03□□□□□ -1.6
SMOQ99835 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.03□□□□□ -1.6
SMOQ99835 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.03□□□□□ -1.6
SMOQ99835 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
SMOQ99835 AC010307.1-201ENST00000467206 836 ntBASIC5.03□□□□□ -1.6
SMOQ99835 AC072039.1-201ENST00000477611 581 ntBASIC5.03□□□□□ -1.6
SMOQ99835 MTATP6P22-201ENST00000507369 598 ntBASIC5.03□□□□□ -1.6
SMOQ99835 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.03□□□□□ -1.6
SMOQ99835 AC093281.2-201ENST00000510153 597 ntBASIC5.03□□□□□ -1.6
SMOQ99835 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.03□□□□□ -1.6
SMOQ99835 CDH12P4-201ENST00000517835 295 ntBASIC5.03□□□□□ -1.6
SMOQ99835 CDH12P3-201ENST00000517935 295 ntBASIC5.03□□□□□ -1.6
SMOQ99835 CDH12P1-201ENST00000518435 295 ntBASIC5.03□□□□□ -1.6
SMOQ99835 IGKV1-32-201ENST00000519290 311 ntBASIC5.03□□□□□ -1.6
SMOQ99835 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.03□□□□□ -1.6
SMOQ99835 AC008562.1-201ENST00000521763 330 ntBASIC5.03□□□□□ -1.6
SMOQ99835 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SMOQ99835 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.03□□□□□ -1.6
SMOQ99835 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.03□□□□□ -1.6
SMOQ99835 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.03□□□□□ -1.6
SMOQ99835 AC137768.1-201ENST00000549998 553 ntBASIC5.03□□□□□ -1.6
SMOQ99835 AC063949.1-201ENST00000552900 865 ntBASIC5.03□□□□□ -1.6
SMOQ99835 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.03□□□□□ -1.6
SMOQ99835 FKBP1BP1-201ENST00000553366 325 ntBASIC5.03□□□□□ -1.6
SMOQ99835 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.03□□□□□ -1.6
SMOQ99835 AC138915.2-201ENST00000569776 97 ntBASIC5.03□□□□□ -1.6
SMOQ99835 CYCSP40-201ENST00000575927 294 ntBASIC5.03□□□□□ -1.6
SMOQ99835 MIR3611-201ENST00000584484 83 ntBASIC5.03□□□□□ -1.6
SMOQ99835 AC008759.1-201ENST00000589783 983 ntBASIC5.03□□□□□ -1.6
SMOQ99835 AC078795.2-201ENST00000602835 1252 ntBASIC5.03□□□□□ -1.6
SMOQ99835 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SMOQ99835 AL049536.1-201ENST00000625043 744 ntBASIC5.03□□□□□ -1.6
SMOQ99835 AC092192.1-201ENST00000633154 1018 ntBASIC5.03□□□□□ -1.6
SMOQ99835 MKKS-204ENST00000639674 192 ntBASIC5.03□□□□□ -1.6
SMOQ99835 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SMOQ99835 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SMOQ99835 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SMOQ99835 HSPA8P17-201ENST00000427029 1382 ntBASIC5.03□□□□□ -1.6
SMOQ99835 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SMOQ99835 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SMOQ99835 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.02□□□□□ -1.61
SMOQ99835 MFSD8-216ENST00000641147 4009 ntBASIC5.02□□□□□ -1.61
SMOQ99835 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SMOQ99835 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.02□□□□□ -1.61
SMOQ99835 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SMOQ99835 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
SMOQ99835 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.02□□□□□ -1.61
SMOQ99835 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SMOQ99835 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SMOQ99835 Y_RNA.18-201ENST00000362461 102 ntBASIC5.02□□□□□ -1.61
SMOQ99835 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SMOQ99835 SUGT1P1-201ENST00000379514 476 ntBASIC5.02□□□□□ -1.61
SMOQ99835 RN7SKP142-201ENST00000411236 328 ntBASIC5.02□□□□□ -1.61
SMOQ99835 RPL37P18-201ENST00000411602 243 ntBASIC5.02□□□□□ -1.61
SMOQ99835 AL590139.1-201ENST00000416267 400 ntBASIC5.02□□□□□ -1.61
SMOQ99835 BOLA3P4-201ENST00000418151 400 ntBASIC5.02□□□□□ -1.61
SMOQ99835 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.02□□□□□ -1.61
SMOQ99835 MTCO2P34-201ENST00000421994 607 ntBASIC5.02□□□□□ -1.61
SMOQ99835 OR5BE1P-201ENST00000425977 939 ntBASIC5.02□□□□□ -1.61
SMOQ99835 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.02□□□□□ -1.61
SMOQ99835 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.02□□□□□ -1.61
SMOQ99835 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.02□□□□□ -1.61
SMOQ99835 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.02□□□□□ -1.61
SMOQ99835 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.02□□□□□ -1.61
SMOQ99835 ZNF114P1-201ENST00000453500 292 ntBASIC5.02□□□□□ -1.61
SMOQ99835 AL513533.1-201ENST00000453728 415 ntBASIC5.02□□□□□ -1.61
SMOQ99835 AC005229.2-201ENST00000456995 399 ntBASIC5.02□□□□□ -1.61
SMOQ99835 GYG1P1-201ENST00000460864 698 ntBASIC5.02□□□□□ -1.61
SMOQ99835 AC006967.1-201ENST00000467608 589 ntBASIC5.02□□□□□ -1.61
SMOQ99835 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
SMOQ99835 RNY4P37-201ENST00000516225 96 ntBASIC5.02□□□□□ -1.61
SMOQ99835 RNU1-6P-201ENST00000516290 144 ntBASIC5.02□□□□□ -1.61
SMOQ99835 HIGD1AP6-201ENST00000521833 279 ntBASIC5.02□□□□□ -1.61
SMOQ99835 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.02□□□□□ -1.61
SMOQ99835 OR5AK1P-201ENST00000524837 922 ntBASIC5.02□□□□□ -1.61
SMOQ99835 AP001189.2-201ENST00000527320 189 ntBASIC5.02□□□□□ -1.61
SMOQ99835 OR5M2P-201ENST00000529003 936 ntBASIC5.02□□□□□ -1.61
SMOQ99835 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.02□□□□□ -1.61
SMOQ99835 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.02□□□□□ -1.61
SMOQ99835 OR7K1P-201ENST00000546439 926 ntBASIC5.02□□□□□ -1.61
SMOQ99835 BNIP3P1-201ENST00000547295 580 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms