Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.54□□□□□ -1.68
ABCA3Q99758 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ABCA3Q99758 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
ABCA3Q99758 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.54□□□□□ -1.68
ABCA3Q99758 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ABCA3Q99758 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ABCA3Q99758 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ABCA3Q99758 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.54□□□□□ -1.68
ABCA3Q99758 BX890604.2-201ENST00000427883 474 ntBASIC4.54□□□□□ -1.68
ABCA3Q99758 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.54□□□□□ -1.68
ABCA3Q99758 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.54□□□□□ -1.68
ABCA3Q99758 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.54□□□□□ -1.68
ABCA3Q99758 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.54□□□□□ -1.68
ABCA3Q99758 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.54□□□□□ -1.68
ABCA3Q99758 AL645568.2-201ENST00000432815 1337 ntBASIC4.54□□□□□ -1.68
ABCA3Q99758 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.54□□□□□ -1.68
ABCA3Q99758 AC011266.1-201ENST00000624119 3569 ntBASIC4.54□□□□□ -1.68
ABCA3Q99758 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
ABCA3Q99758 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
ABCA3Q99758 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
ABCA3Q99758 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.53□□□□□ -1.68
ABCA3Q99758 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.53□□□□□ -1.68
ABCA3Q99758 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.53□□□□□ -1.68
ABCA3Q99758 RPS20P1-201ENST00000434853 354 ntBASIC4.53□□□□□ -1.68
ABCA3Q99758 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.53□□□□□ -1.68
ABCA3Q99758 HIGD1AP3-201ENST00000515857 278 ntBASIC4.53□□□□□ -1.68
ABCA3Q99758 AC008489.1-201ENST00000524271 483 ntBASIC4.53□□□□□ -1.68
ABCA3Q99758 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.53□□□□□ -1.68
ABCA3Q99758 AC015802.5-201ENST00000607478 399 ntBASIC4.53□□□□□ -1.68
ABCA3Q99758 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.53□□□□□ -1.68
ABCA3Q99758 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ABCA3Q99758 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.53□□□□□ -1.68
ABCA3Q99758 SAGE4P-201ENST00000442271 3381 ntBASIC4.53□□□□□ -1.68
ABCA3Q99758 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
ABCA3Q99758 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ABCA3Q99758 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ABCA3Q99758 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ABCA3Q99758 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.52□□□□□ -1.69
ABCA3Q99758 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.52□□□□□ -1.69
ABCA3Q99758 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.52□□□□□ -1.69
ABCA3Q99758 AC010486.1-201ENST00000511793 424 ntBASIC4.52□□□□□ -1.69
ABCA3Q99758 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.52□□□□□ -1.69
ABCA3Q99758 MTCO1P24-201ENST00000515438 1558 ntBASIC4.52□□□□□ -1.69
ABCA3Q99758 NDUFB9P3-201ENST00000521269 501 ntBASIC4.52□□□□□ -1.69
ABCA3Q99758 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ABCA3Q99758 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.52□□□□□ -1.69
ABCA3Q99758 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ABCA3Q99758 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.52□□□□□ -1.69
ABCA3Q99758 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
ABCA3Q99758 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
ABCA3Q99758 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.52□□□□□ -1.69
ABCA3Q99758 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.52□□□□□ -1.69
ABCA3Q99758 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ABCA3Q99758 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
ABCA3Q99758 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
ABCA3Q99758 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ABCA3Q99758 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.52□□□□□ -1.69
ABCA3Q99758 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.52□□□□□ -1.69
ABCA3Q99758 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.52□□□□□ -1.69
ABCA3Q99758 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.52□□□□□ -1.69
ABCA3Q99758 APOOP4-201ENST00000513530 597 ntBASIC4.52□□□□□ -1.69
ABCA3Q99758 TCP11X3P-202ENST00000514289 1254 ntBASIC4.52□□□□□ -1.69
ABCA3Q99758 AC027309.2-201ENST00000520566 192 ntBASIC4.52□□□□□ -1.69
ABCA3Q99758 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.52□□□□□ -1.69
ABCA3Q99758 HIGD1AP1-201ENST00000550979 275 ntBASIC4.52□□□□□ -1.69
ABCA3Q99758 MRPS35P3-201ENST00000603189 709 ntBASIC4.52□□□□□ -1.69
ABCA3Q99758 OR7M1P-201ENST00000608946 533 ntBASIC4.52□□□□□ -1.69
ABCA3Q99758 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.52□□□□□ -1.69
ABCA3Q99758 AL353684.1-201ENST00000622677 1120 ntBASIC4.52□□□□□ -1.69
ABCA3Q99758 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.52□□□□□ -1.69
ABCA3Q99758 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ABCA3Q99758 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ABCA3Q99758 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ABCA3Q99758 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ABCA3Q99758 RNA5SP52-201ENST00000362448 134 ntBASIC4.51□□□□□ -1.69
ABCA3Q99758 RNU1-108P-201ENST00000362556 161 ntBASIC4.51□□□□□ -1.69
ABCA3Q99758 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
ABCA3Q99758 HMGN1P24-201ENST00000412282 298 ntBASIC4.51□□□□□ -1.69
ABCA3Q99758 RPL21P109-201ENST00000422213 475 ntBASIC4.51□□□□□ -1.69
ABCA3Q99758 AL353678.1-201ENST00000422735 741 ntBASIC4.51□□□□□ -1.69
ABCA3Q99758 AL591623.2-201ENST00000449978 222 ntBASIC4.51□□□□□ -1.69
ABCA3Q99758 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.51□□□□□ -1.69
ABCA3Q99758 NPM1P17-201ENST00000479221 602 ntBASIC4.51□□□□□ -1.69
ABCA3Q99758 OR2A20P-203ENST00000498397 1268 ntBASIC4.51□□□□□ -1.69
ABCA3Q99758 RNA5SP356-201ENST00000515972 94 ntBASIC4.51□□□□□ -1.69
ABCA3Q99758 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.51□□□□□ -1.69
ABCA3Q99758 AC020914.4-201ENST00000597690 277 ntBASIC4.51□□□□□ -1.69
ABCA3Q99758 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.51□□□□□ -1.69
ABCA3Q99758 AC100793.4-201ENST00000613683 429 ntBASIC4.51□□□□□ -1.69
ABCA3Q99758 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ABCA3Q99758 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ABCA3Q99758 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.51□□□□□ -1.69
ABCA3Q99758 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ABCA3Q99758 NMD3P1-201ENST00000439704 1488 ntBASIC4.5□□□□□ -1.69
ABCA3Q99758 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
ABCA3Q99758 RNA5SP126-201ENST00000365092 109 ntBASIC4.5□□□□□ -1.69
ABCA3Q99758 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ABCA3Q99758 BX119904.1-201ENST00000432026 348 ntBASIC4.5□□□□□ -1.69
ABCA3Q99758 ATP5C1P1-201ENST00000441945 895 ntBASIC4.5□□□□□ -1.69
ABCA3Q99758 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms