Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.01□□□□□ -1.29
PHOX2BQ99453 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PHOX2BQ99453 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PHOX2BQ99453 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
PHOX2BQ99453 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.01□□□□□ -1.29
PHOX2BQ99453 KARSP2-201ENST00000415696 1639 ntBASIC7.01□□□□□ -1.29
PHOX2BQ99453 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PHOX2BQ99453 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
PHOX2BQ99453 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PHOX2BQ99453 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.01□□□□□ -1.29
PHOX2BQ99453 SMG1P7-201ENST00000565246 2704 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 AC138915.4-201ENST00000565549 4147 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7□□□□□ -1.29
PHOX2BQ99453 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7□□□□□ -1.29
PHOX2BQ99453 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PHOX2BQ99453 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PHOX2BQ99453 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7□□□□□ -1.29
PHOX2BQ99453 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7□□□□□ -1.29
PHOX2BQ99453 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
PHOX2BQ99453 SNORA68-201ENST00000384437 133 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 Y_RNA.645-201ENST00000391229 102 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 RNU2-36P-201ENST00000410361 191 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC7□□□□□ -1.29
PHOX2BQ99453 GJA6P-201ENST00000415117 1042 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC7□□□□□ -1.29
PHOX2BQ99453 AC009965.2-201ENST00000425328 970 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 AL031736.2-201ENST00000426573 787 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC7□□□□□ -1.29
PHOX2BQ99453 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC7□□□□□ -1.29
PHOX2BQ99453 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7□□□□□ -1.29
PHOX2BQ99453 RN7SL751P-201ENST00000473281 284 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 RPS27AP1-201ENST00000475545 471 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 DEFB109F-201ENST00000491870 277 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 RNU6-408P-201ENST00000515910 100 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 RNU6-1143P-201ENST00000516125 104 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 RNU2-53P-201ENST00000516257 147 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 RNU6-1092P-201ENST00000516955 87 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 RNU4ATAC10P-201ENST00000516967 122 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 HMGN1P28-201ENST00000521340 364 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 AC022616.4-201ENST00000522985 181 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 TRIM77BP-201ENST00000524985 1119 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 AP005639.1-201ENST00000526939 192 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC7□□□□□ -1.29
PHOX2BQ99453 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7□□□□□ -1.29
PHOX2BQ99453 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7□□□□□ -1.29
PHOX2BQ99453 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7□□□□□ -1.29
PHOX2BQ99453 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7□□□□□ -1.29
PHOX2BQ99453 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC7□□□□□ -1.29
PHOX2BQ99453 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7□□□□□ -1.29
PHOX2BQ99453 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC7□□□□□ -1.29
PHOX2BQ99453 AC020910.3-201ENST00000603701 874 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 AC012175.1-201ENST00000603755 531 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7□□□□□ -1.29
PHOX2BQ99453 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 AL161637.1-201ENST00000622380 412 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
PHOX2BQ99453 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
PHOX2BQ99453 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PHOX2BQ99453 MAPK10-357ENST00000641831 2858 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7□□□□□ -1.29
PHOX2BQ99453 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
PHOX2BQ99453 ZNF734P-201ENST00000419494 1534 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
PHOX2BQ99453 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7□□□□□ -1.29
PHOX2BQ99453 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PHOX2BQ99453 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
PHOX2BQ99453 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PHOX2BQ99453 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7□□□□□ -1.29
PHOX2BQ99453 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7□□□□□ -1.29
PHOX2BQ99453 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PHOX2BQ99453 UQCRC2P1-201ENST00000417777 1332 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
PHOX2BQ99453 ZNF33CP-201ENST00000432492 2030 ntBASIC7□□□□□ -1.29
PHOX2BQ99453 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PHOX2BQ99453 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PHOX2BQ99453 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PHOX2BQ99453 MTCO1P24-201ENST00000515438 1558 ntBASIC6.99□□□□□ -1.29
PHOX2BQ99453 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PHOX2BQ99453 GABPAP-201ENST00000419271 1356 ntBASIC6.99□□□□□ -1.29
PHOX2BQ99453 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC6.99□□□□□ -1.29
PHOX2BQ99453 AC007406.5-201ENST00000570140 3170 ntBASIC6.99□□□□□ -1.29
PHOX2BQ99453 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC6.99□□□□□ -1.29
PHOX2BQ99453 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.99□□□□□ -1.29
PHOX2BQ99453 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.99□□□□□ -1.29
PHOX2BQ99453 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.99□□□□□ -1.29
PHOX2BQ99453 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PHOX2BQ99453 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PHOX2BQ99453 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PHOX2BQ99453 RNA5SP514-201ENST00000363717 111 ntBASIC6.99□□□□□ -1.29
PHOX2BQ99453 Y_RNA.399-201ENST00000383955 105 ntBASIC6.99□□□□□ -1.29
PHOX2BQ99453 Y_RNA.424-201ENST00000384063 103 ntBASIC6.99□□□□□ -1.29
PHOX2BQ99453 RNU6-550P-201ENST00000391057 101 ntBASIC6.99□□□□□ -1.29
PHOX2BQ99453 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PHOX2BQ99453 DBIP1-201ENST00000401435 260 ntBASIC6.99□□□□□ -1.29
PHOX2BQ99453 Y_RNA.594-201ENST00000410373 140 ntBASIC6.99□□□□□ -1.29
PHOX2BQ99453 RNU2-15P-201ENST00000410692 191 ntBASIC6.99□□□□□ -1.29
PHOX2BQ99453 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.99□□□□□ -1.29
PHOX2BQ99453 RPL6P29-201ENST00000414863 865 ntBASIC6.99□□□□□ -1.29
PHOX2BQ99453 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.99□□□□□ -1.29
PHOX2BQ99453 USMG5P1-201ENST00000425964 177 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms