Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 MTCYBP24-201ENST00000420387 1106 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 GTF2IP23-201ENST00000423746 351 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 AC000111.3-201ENST00000433478 193 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 HMGB3P10-201ENST00000434734 572 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 UBE2V1P3-201ENST00000439651 417 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 AL592437.1-201ENST00000443781 492 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 AL353898.1-201ENST00000444055 238 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 AL354714.3-201ENST00000447284 493 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 HMGB1P5-202ENST00000451497 985 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 MTND1P11-201ENST00000456661 876 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 HMGN2P25-201ENST00000486956 268 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 AL358832.1-201ENST00000497800 389 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 COX6B1P5-201ENST00000509843 249 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 CENPUP1-201ENST00000526649 1202 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 AP001804.2-201ENST00000533932 910 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 UBE2FP2-201ENST00000566646 462 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 MIR4675-201ENST00000577898 77 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 RMST_5.1-201ENST00000618704 126 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 MIR6730-201ENST00000622213 67 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AL031595.2-201ENST00000624215 19071 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 SNORA58B-201ENST00000364259 136 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 RNU6-1251P-201ENST00000364502 107 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 Y_RNA.509-201ENST00000384506 99 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 SNORA66-201ENST00000384792 133 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 DNAJC19P6-201ENST00000401853 280 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AL133270.1-201ENST00000402635 279 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 FGF7P8-201ENST00000402994 292 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AL390316.1-201ENST00000406279 553 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AL590002.1-201ENST00000406554 418 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 RNA5SP80-201ENST00000410475 111 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 RPS7P13-201ENST00000413955 498 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AL139413.1-201ENST00000421309 217 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AC007394.1-201ENST00000421941 531 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 ETF1P3-201ENST00000430422 1160 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 GDI2P2-201ENST00000445131 608 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AC007677.1-201ENST00000445757 515 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AC004980.3-201ENST00000447046 365 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 DPPA3P1-201ENST00000448050 469 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AL645937.3-201ENST00000453647 936 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 RPL5P24-201ENST00000463742 885 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AL672167.3-201ENST00000465951 960 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 RPL7AP10-201ENST00000481016 791 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 RN7SL808P-201ENST00000496066 299 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AC006499.5-201ENST00000505037 514 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AC117522.3-201ENST00000507974 584 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AC024589.1-201ENST00000512207 263 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 SNORA31.13-201ENST00000516624 135 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms