Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SNORD65-201ENST00000391079 73 ntBASIC7.09□□□□□ -1.27
TRIM47Q96LD4 RPL26P37-201ENST00000411983 438 ntBASIC7.09□□□□□ -1.27
TRIM47Q96LD4 AC116036.1-201ENST00000412199 367 ntBASIC7.09□□□□□ -1.27
TRIM47Q96LD4 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC7.09□□□□□ -1.27
TRIM47Q96LD4 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM47Q96LD4 RPL35AP31-201ENST00000418340 337 ntBASIC7.09□□□□□ -1.27
TRIM47Q96LD4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC7.09□□□□□ -1.27
TRIM47Q96LD4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM47Q96LD4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM47Q96LD4 OR51AB1P-201ENST00000429046 620 ntBASIC7.09□□□□□ -1.27
TRIM47Q96LD4 SETP5-201ENST00000437270 562 ntBASIC7.09□□□□□ -1.27
TRIM47Q96LD4 RPL23AP16-201ENST00000441715 421 ntBASIC7.09□□□□□ -1.27
TRIM47Q96LD4 TXNP1-201ENST00000441872 371 ntBASIC7.09□□□□□ -1.27
TRIM47Q96LD4 AL353898.1-201ENST00000444055 238 ntBASIC7.09□□□□□ -1.27
TRIM47Q96LD4 AC097499.1-201ENST00000444277 208 ntBASIC7.09□□□□□ -1.27
TRIM47Q96LD4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM47Q96LD4 RPL12P25-201ENST00000455592 494 ntBASIC7.09□□□□□ -1.27
TRIM47Q96LD4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM47Q96LD4 MTCO1P29-201ENST00000496868 288 ntBASIC7.09□□□□□ -1.27
TRIM47Q96LD4 CYCSP22-201ENST00000517555 339 ntBASIC7.09□□□□□ -1.27
TRIM47Q96LD4 HMGB1P19-201ENST00000517578 577 ntBASIC7.09□□□□□ -1.27
TRIM47Q96LD4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM47Q96LD4 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM47Q96LD4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM47Q96LD4 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM47Q96LD4 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC7.09□□□□□ -1.27
TRIM47Q96LD4 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC7.09□□□□□ -1.27
TRIM47Q96LD4 BNIP3P16-201ENST00000589779 534 ntBASIC7.09□□□□□ -1.27
TRIM47Q96LD4 AC104687.2-201ENST00000604442 342 ntBASIC7.09□□□□□ -1.27
TRIM47Q96LD4 AC011626.1-201ENST00000604710 562 ntBASIC7.09□□□□□ -1.27
TRIM47Q96LD4 RPL12P48-201ENST00000605620 304 ntBASIC7.09□□□□□ -1.27
TRIM47Q96LD4 AL022345.1-201ENST00000607292 135 ntBASIC7.09□□□□□ -1.27
TRIM47Q96LD4 MIR7159-201ENST00000620587 66 ntBASIC7.09□□□□□ -1.27
TRIM47Q96LD4 AC006840.1-201ENST00000623069 542 ntBASIC7.09□□□□□ -1.27
TRIM47Q96LD4 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC7.09□□□□□ -1.27
TRIM47Q96LD4 BIN2P1-201ENST00000504996 1530 ntBASIC7.09□□□□□ -1.27
TRIM47Q96LD4 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM47Q96LD4 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
TRIM47Q96LD4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM47Q96LD4 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
TRIM47Q96LD4 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.09□□□□□ -1.28
TRIM47Q96LD4 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.09□□□□□ -1.28
TRIM47Q96LD4 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
TRIM47Q96LD4 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 MTND5P10-201ENST00000603719 1809 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 ASNSP3-201ENST00000451989 1306 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 AC110373.1-201ENST00000505994 3505 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 SNORD50B-201ENST00000364995 70 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 RNU6-831P-201ENST00000384548 107 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 RPL7P25-201ENST00000404151 721 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 DPPA2P3-201ENST00000411853 655 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 HNRNPDLP1-201ENST00000412834 550 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 UBE2V1P14-201ENST00000415815 558 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 LINC01347-201ENST00000417964 355 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 HSPE1P1-201ENST00000421494 318 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 NANOGP6-201ENST00000429190 847 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 CBX1P1-201ENST00000440184 427 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 MORF4-201ENST00000447135 971 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 COX6CP18-201ENST00000448769 222 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 AC092324.1-201ENST00000468671 324 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 AC107398.1-201ENST00000486904 505 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 AC010343.2-201ENST00000510162 224 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 RNY3P15-201ENST00000516297 97 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 RNA5SP34-201ENST00000516887 130 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 KCTD9P6-201ENST00000522306 950 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 AC009117.1-201ENST00000563948 554 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 AC104695.2-201ENST00000605056 775 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 uc_338.15-201ENST00000615470 191 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 AC009318.4-201ENST00000620496 486 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 AC099654.6-201ENST00000636487 512 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 MIR193BHG-214ENST00000641765 509 ntBASIC7.08□□□□□ -1.28
TRIM47Q96LD4 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM47Q96LD4 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 192.5 ms