Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AP000580.1-201ENST00000404439 358 ntBASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 AL080315.1-201ENST00000406055 466 ntBASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 RPL12P3-201ENST00000440080 396 ntBASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 AL031584.1-201ENST00000447169 754 ntBASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 RPS27AP15-201ENST00000447672 466 ntBASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 AC091685.2-201ENST00000454924 864 ntBASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 CYCSP34-201ENST00000458172 304 ntBASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 RPS3AP41-201ENST00000462701 778 ntBASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 SNORD116-26-201ENST00000516006 96 ntBASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 AP001207.1-201ENST00000524051 481 ntBASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 AP001880.2-201ENST00000538233 448 ntBASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 AC051619.2-201ENST00000559063 397 ntBASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 AC040904.1-201ENST00000590850 223 ntBASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 AL358072.1-201ENST00000604156 575 ntBASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 AC025574.1-201ENST00000554784 1653 ntBASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 Z95327.2-201ENST00000414579 1873 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 AL049737.1-201ENST00000413920 1403 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 SCN1A-220ENST00000641603 12506 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 ZNF542P-204ENST00000482727 1305 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 AL592291.1-201ENST00000403830 352 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 RNA5SP113-201ENST00000410486 84 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 AL591848.1-201ENST00000413092 322 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 AC098592.1-201ENST00000419352 333 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 AC004074.1-201ENST00000421810 1063 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 AC005345.1-201ENST00000431868 217 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 NRBF2P3-201ENST00000432731 865 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 MTND4P32-201ENST00000437189 1237 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 AL445567.1-201ENST00000439121 144 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 AL034418.1-201ENST00000448675 860 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 MTND1P16-201ENST00000465177 898 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 AC093270.2-201ENST00000486157 792 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 NDUFA5P12-201ENST00000503796 343 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 RN7SKP46-201ENST00000515942 234 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 DYNLL1P4-201ENST00000549314 266 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 MIR4436B2-201ENST00000581415 91 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 MIR4436B1-201ENST00000583272 91 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 AL512782.1-201ENST00000603093 364 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 AL392048.1-201ENST00000613946 534 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 AC234782.5-201ENST00000617723 324 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 AC053481.2-202ENST00000582394 1500 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 SDAD1P1-202ENST00000524156 2051 ntBASIC5.32□□□□□ -1.56
CDK5RAP3Q96JB5 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 AP000526.1-201ENST00000603308 1388 ntBASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 RNU5D-1-201ENST00000363299 116 ntBASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 SNORD116-1-201ENST00000384335 95 ntBASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 RNU6-1151P-201ENST00000384684 107 ntBASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 AL139098.1-201ENST00000407291 389 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms