Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 GLULP6-201ENST00000399502 913 ntBASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 AL592291.1-201ENST00000403830 352 ntBASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 HNRNPDP2-201ENST00000406475 478 ntBASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 RNU2-42P-201ENST00000410697 113 ntBASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 AL161449.1-201ENST00000414531 1199 ntBASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 AL590609.2-201ENST00000421430 368 ntBASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 MTND3P1-201ENST00000441336 220 ntBASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 RPS15AP1-201ENST00000457423 391 ntBASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 RNU2-30P-201ENST00000516209 141 ntBASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 HMGB1P19-201ENST00000517578 577 ntBASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 AC093519.1-201ENST00000566109 298 ntBASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 AC022726.1-201ENST00000587475 207 ntBASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 AL158042.1-201ENST00000605338 460 ntBASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 SNORD91B-202ENST00000608459 222 ntBASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 AP000346.3-201ENST00000622821 210 ntBASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 MIR4278-201ENST00000636094 69 ntBASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 AC068620.4-201ENST00000636730 1182 ntBASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.65□□□□□ -1.51
CHMP4CQ96CF2 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.65□□□□□ -1.51
CHMP4CQ96CF2 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.65□□□□□ -1.51
CHMP4CQ96CF2 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 NCLP2-201ENST00000416078 1462 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AC087190.4-201ENST00000574616 8334 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 RNU5D-1-201ENST00000363299 116 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 RNU6-115P-201ENST00000364310 107 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 RNVU1-6-201ENST00000364688 164 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 RNU6-157P-201ENST00000383957 107 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 RPL23AP47-201ENST00000408017 460 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AL807761.1-201ENST00000417622 171 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AC233981.1-201ENST00000423224 461 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 MTND1P32-201ENST00000433043 938 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 SETD6P1-201ENST00000444575 317 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AC073264.2-201ENST00000448886 166 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 EIF4A1P11-201ENST00000451239 222 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 CEACAMP6-201ENST00000452007 574 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 NF1P3-201ENST00000457709 450 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AC010307.1-201ENST00000467206 836 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 RPL23AP65-201ENST00000475608 468 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 MTND6P6-201ENST00000478031 263 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 GAPDHP36-201ENST00000480688 918 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AC126121.1-201ENST00000482313 553 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 OSBPL9P5-201ENST00000542581 171 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AC087477.6-201ENST00000559595 843 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AC005412.1-201ENST00000580812 1049 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 HMGB2P1-201ENST00000591146 634 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 BNIP3P24-201ENST00000593398 557 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AL512782.1-201ENST00000603093 364 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AL133507.1-201ENST00000605269 557 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AP001273.1-201ENST00000624493 3152 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 TLK1P1-201ENST00000456760 2440 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms