Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
CLHC1Q8NHS4 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 HMGB1P13-201ENST00000406019 642 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 MTHFD2P2-201ENST00000407725 247 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AL121578.1-201ENST00000428051 892 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 ARF4P2-201ENST00000430209 526 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 ARL5AP3-201ENST00000439327 386 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 ARL5AP2-201ENST00000444698 533 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 HMGB1P26-201ENST00000452520 628 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 TRBV12-2-201ENST00000489763 344 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC004069.2-201ENST00000505438 1114 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC117525.1-201ENST00000515228 503 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 RNA5SP208-201ENST00000516156 78 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 RNU4-60P-201ENST00000517239 135 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 OR4A12P-201ENST00000530847 918 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC090877.1-201ENST00000561418 344 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 MIR5047-201ENST00000579212 100 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 EIF1P6-201ENST00000600054 334 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC245389.2-201ENST00000616023 576 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC243756.2-201ENST00000618406 463 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC242843.1-201ENST00000618702 573 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 AC091905.1-201ENST00000624400 311 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 MIR7641-1-201ENST00000627518 61 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 RLIMP1-201ENST00000339626 1680 ntBASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.71□□□□□ -1.82
CLHC1Q8NHS4 CASC19-261ENST00000641853 1638 ntBASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 AC126755.2-208ENST00000327792 462 ntBASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 AC138969.1-213ENST00000331436 462 ntBASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 RPL21P65-201ENST00000406094 466 ntBASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 NIPA2P1-201ENST00000426223 976 ntBASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 ATP5HP2-201ENST00000433885 485 ntBASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 MED6P1-201ENST00000439659 713 ntBASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 AC239367.2-201ENST00000447309 705 ntBASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 NDUFA5P9-201ENST00000472609 340 ntBASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 RPS4XP15-201ENST00000489210 795 ntBASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 AC138701.1-201ENST00000524329 714 ntBASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 YPEL5P3-201ENST00000547227 352 ntBASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 MIR4284-201ENST00000578924 81 ntBASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 AC010928.3-201ENST00000587712 541 ntBASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 AC113194.1-201ENST00000606037 500 ntBASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 MIR6867-201ENST00000610636 67 ntBASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms