Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC117470.1-201ENST00000381974 330 ntBASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AC090114.1-201ENST00000393266 448 ntBASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AL359694.1-201ENST00000403247 604 ntBASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AC007529.1-201ENST00000418574 2178 ntBASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AL359633.1-201ENST00000421403 310 ntBASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AF228730.2-201ENST00000438784 848 ntBASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AC079781.1-201ENST00000441505 394 ntBASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 CRYGGP-201ENST00000443337 145 ntBASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AL356133.1-201ENST00000444762 372 ntBASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 RPL23AP43-201ENST00000446445 471 ntBASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 RN7SL561P-201ENST00000488553 281 ntBASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AC021146.2-201ENST00000504736 556 ntBASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 SNORA58-201ENST00000505219 137 ntBASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 RPL12P48-201ENST00000605620 304 ntBASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AL132822.1-201ENST00000617063 513 ntBASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AC005899.6-201ENST00000620729 297 ntBASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AL161637.1-201ENST00000622380 412 ntBASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 uc_338.22-201ENST00000622722 187 ntBASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AC011155.2-201ENST00000623202 216 ntBASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AP000432.2-201ENST00000624164 2048 ntBASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 BDP1P-201ENST00000582658 1990 ntBASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 RN7SKP47-201ENST00000365347 328 ntBASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 AL358176.2-201ENST00000425769 204 ntBASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 Z95327.1-201ENST00000446082 482 ntBASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 SLAMF6P1-201ENST00000451067 602 ntBASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 HMGB3P22-202ENST00000451823 572 ntBASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 RPL36AP13-201ENST00000457490 317 ntBASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 AC128716.1-201ENST00000475129 166 ntBASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 AC093303.1-201ENST00000514549 295 ntBASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 RNA5SP518-201ENST00000515957 119 ntBASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 RNU6-1046P-201ENST00000516538 107 ntBASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 RNU6-1088P-201ENST00000516850 104 ntBASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 AC109635.4-202ENST00000531666 412 ntBASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 IMMP1LP2-201ENST00000552954 492 ntBASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 MIR6070-201ENST00000613967 103 ntBASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 AC007347.2-201ENST00000623044 180 ntBASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 AC129502.1-201ENST00000623261 1654 ntBASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 AP005432.1-201ENST00000580891 3485 ntBASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms