Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
KRT78Q8N1N4 HNRNPCP4-201ENST00000571636 900 ntBASIC4.91□□□□□ -1.62
KRT78Q8N1N4 MIR4637-201ENST00000582405 84 ntBASIC4.91□□□□□ -1.62
KRT78Q8N1N4 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.91□□□□□ -1.62
KRT78Q8N1N4 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.91□□□□□ -1.62
KRT78Q8N1N4 VN1R92P-201ENST00000598511 928 ntBASIC4.91□□□□□ -1.62
KRT78Q8N1N4 AC090425.2-201ENST00000608818 501 ntBASIC4.91□□□□□ -1.62
KRT78Q8N1N4 AP000648.2-201ENST00000624182 404 ntBASIC4.91□□□□□ -1.62
KRT78Q8N1N4 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRT78Q8N1N4 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
KRT78Q8N1N4 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRT78Q8N1N4 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRT78Q8N1N4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
KRT78Q8N1N4 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRT78Q8N1N4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRT78Q8N1N4 AL592148.3-201ENST00000608771 2646 ntBASIC4.91□□□□□ -1.62
KRT78Q8N1N4 AL592437.2-201ENST00000421655 2434 ntBASIC4.91□□□□□ -1.62
KRT78Q8N1N4 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.91□□□□□ -1.62
KRT78Q8N1N4 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
KRT78Q8N1N4 DDX18P3-201ENST00000404856 2007 ntBASIC4.9□□□□□ -1.62
KRT78Q8N1N4 THAP12P5-201ENST00000405864 2275 ntBASIC4.9□□□□□ -1.62
KRT78Q8N1N4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.9□□□□□ -1.62
KRT78Q8N1N4 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
KRT78Q8N1N4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.9□□□□□ -1.62
KRT78Q8N1N4 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.9□□□□□ -1.62
KRT78Q8N1N4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
KRT78Q8N1N4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.9□□□□□ -1.62
KRT78Q8N1N4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.9□□□□□ -1.62
KRT78Q8N1N4 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.9□□□□□ -1.62
KRT78Q8N1N4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
KRT78Q8N1N4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
KRT78Q8N1N4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
KRT78Q8N1N4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 AC008549.2-201ENST00000333482 706 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 RNU1-130P-201ENST00000363930 160 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 Y_RNA.560-201ENST00000384689 102 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 GLULP6-201ENST00000399502 913 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 EIF5P1-201ENST00000400019 1231 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 AL024474.1-201ENST00000404655 591 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 RN7SKP114-201ENST00000410327 279 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 AL031779.1-201ENST00000415663 330 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 AL139148.1-201ENST00000427122 680 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 RPL7P31-201ENST00000450192 724 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 USP9YP10-201ENST00000454868 628 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 AC097493.1-201ENST00000463958 372 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 RPS15AP17-201ENST00000470598 390 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 AC087385.1-201ENST00000475062 312 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 RPL30P6-201ENST00000475925 342 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 UBA52P7-201ENST00000486088 380 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 HMGN2P25-201ENST00000486956 268 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 SNRPCP2-201ENST00000504370 475 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 HIGD1AP14-201ENST00000507617 282 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 PGBD4P4-201ENST00000509673 613 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 USP9YP5-201ENST00000511770 630 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 MTCYBP43-201ENST00000513621 740 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 AC016065.2-201ENST00000514530 444 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 IGLVIV-53-201ENST00000520107 367 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 DEFB131D-201ENST00000526803 184 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 OR5AN2P-201ENST00000534535 896 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 MTCYBP33-201ENST00000575007 1130 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 AC104785.1-201ENST00000603220 588 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 YWHAQP7-201ENST00000603536 658 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 MIR6826-201ENST00000617808 98 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 AC008443.7-201ENST00000622195 246 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 U6.101-201ENST00000637707 76 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 AC104118.1-201ENST00000607625 1589 ntBASIC4.9□□□□□ -1.63
KRT78Q8N1N4 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
KRT78Q8N1N4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRT78Q8N1N4 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRT78Q8N1N4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms