Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
BEST3Q8N1M1 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.27□□□□□ -1.73
BEST3Q8N1M1 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.27□□□□□ -1.73
BEST3Q8N1M1 AC008751.2-201ENST00000597885 980 ntBASIC4.27□□□□□ -1.73
BEST3Q8N1M1 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.27□□□□□ -1.73
BEST3Q8N1M1 BNIP3P26-201ENST00000600827 554 ntBASIC4.27□□□□□ -1.73
BEST3Q8N1M1 AC004908.3-201ENST00000610248 625 ntBASIC4.27□□□□□ -1.73
BEST3Q8N1M1 AP000255.1-201ENST00000610276 676 ntBASIC4.27□□□□□ -1.73
BEST3Q8N1M1 AC107075.1-201ENST00000613695 314 ntBASIC4.27□□□□□ -1.73
BEST3Q8N1M1 AL133243.1-201ENST00000614487 366 ntBASIC4.27□□□□□ -1.73
BEST3Q8N1M1 AC083809.1-201ENST00000615051 472 ntBASIC4.27□□□□□ -1.73
BEST3Q8N1M1 AC105227.2-201ENST00000615075 605 ntBASIC4.27□□□□□ -1.73
BEST3Q8N1M1 AL731566.2-201ENST00000618971 317 ntBASIC4.27□□□□□ -1.73
BEST3Q8N1M1 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
BEST3Q8N1M1 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
BEST3Q8N1M1 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.27□□□□□ -1.73
BEST3Q8N1M1 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
BEST3Q8N1M1 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
BEST3Q8N1M1 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.27□□□□□ -1.73
BEST3Q8N1M1 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
BEST3Q8N1M1 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 DCAF13P3-201ENST00000561147 1334 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 DHX9P1-201ENST00000436565 3076 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 Z99496.1-201ENST00000469424 1477 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 RNU6-1214P-201ENST00000363650 109 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 RNU6-83P-201ENST00000384568 112 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 VDAC2P1-201ENST00000399358 958 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AL592291.1-201ENST00000403830 352 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 ELOCP19-201ENST00000411919 318 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 Z93242.1-201ENST00000427102 353 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 RPS26P47-201ENST00000427219 348 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 USP9YP31-201ENST00000431405 881 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 RPS6P15-201ENST00000431996 751 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 RPL7P34-201ENST00000433316 712 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AC091390.1-201ENST00000433904 331 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 SEPT7P5-201ENST00000434048 306 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AC073143.1-201ENST00000436316 395 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AC092393.1-201ENST00000439625 742 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 RPS26P2-201ENST00000440331 348 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 ARL4AP3-201ENST00000441452 574 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 EXTL2P1-201ENST00000446218 416 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 RPL7P59-201ENST00000447700 943 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 VN1R40P-201ENST00000455196 941 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 RN7SL385P-201ENST00000468873 276 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AC108734.3-201ENST00000481241 1165 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AC093267.1-201ENST00000489176 961 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 UBA52P3-201ENST00000491303 382 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AC109471.1-201ENST00000511631 612 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AC021146.3-201ENST00000511911 260 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AP001207.1-201ENST00000524051 481 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AC009094.1-201ENST00000564443 426 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AC018552.3-201ENST00000567416 561 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AC008782.1-201ENST00000603386 430 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AL356218.2-201ENST00000605264 187 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AC023158.2-201ENST00000614876 543 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AP003485.2-201ENST00000623636 610 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 MIR1322-201ENST00000638013 71 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 AL445487.1-201ENST00000415694 1580 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 RAD17P1-201ENST00000418130 2042 ntBASIC4.26□□□□□ -1.73
BEST3Q8N1M1 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BEST3Q8N1M1 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 MAPK10-303ENST00000641324 3959 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AC021146.4-201ENST00000309229 279 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 FAM133CP-201ENST00000332869 704 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms